Heatmap: Cluster_48 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Diurnal Dark 2h
Diurnal Dark 6h
Diurnal Light 2h
Diurnal Light 6h
Diurnal Light 10h
Diurnal Light 14h
20°C Liquid
4°C Liquid
20°C Desiccation
4°C Desiccation
20°C plate
CadmiumCl 250 µM, 24h
Dark, 24h
HL (900 µmol photons m-2 s-1, 1 h)
Cold (4°C )+ HL: 900 µmol photons m-2 s-1, 1h
Mannitol 300 mM,24h
NaCl 150 mM, 24h
UV (exactly 385 nm, 1400 µW/cm2, 1h)
pH = 9, 24h
- - 0.76 3.23 - - - - - 0.48 0.17 - - 0.76 - 0.37 0.39 -0.35 -1.59
- -2.28 1.5 1.82 - -0.02 -0.42 - - 1.23 -0.9 -0.49 -1.06 -0.05 -0.61 0.34 -0.79 1.5 -1.64
0.34 -0.29 -0.42 - 1.1 -1.42 - - - 0.72 0.25 -2.92 - 0.86 0.47 1.74 -4.13 -0.18 1.69
-0.83 - 0.92 1.09 - 1.09 - - - -1.45 -3.2 -0.26 -0.89 0.6 -1.1 1.49 0.74 1.67 -0.34
- - - 3.21 - 2.95 - - - - - - - -0.99 - 0.61 - - -
- - - 3.92 - - - - - - -1.64 -1.75 - - -0.01 -1.13 -0.95 -0.55 -0.86
- -0.08 3.43 2.05 -1.0 - - -0.55 0.36 -0.8 - - - -3.45 - - - - -
- 1.16 - 0.1 1.01 0.93 -0.72 - -1.69 1.77 -1.22 - -0.12 -0.31 -2.38 -0.4 -0.02 -1.43 1.58
- - - 1.79 0.26 1.66 -0.99 1.51 -0.81 1.19 -0.04 - - -0.35 -0.94 0.17 -1.12 0.15 -
- - - - 1.31 0.12 0.81 - - 0.92 1.27 - - 1.63 - -0.3 0.75 1.4 0.21
- - 4.25 - - - - - - - - - - - - - - - -
- - 0.43 4.14 - - - - - - - - - - - - - - -
- - 2.18 2.14 - 2.53 - - - - -2.15 - -1.99 - -0.29 - -2.18 -1.36 1.24
- - - 4.08 - - - - - - - - - 1.04 - - - - -
0.45 -0.53 -0.05 2.83 -0.4 - - 0.84 -1.71 -0.28 -1.39 - 0.4 -2.64 0.39 0.12 -1.26 -1.32 -3.51
-2.42 -0.35 0.23 -0.11 0.43 0.93 0.03 -1.49 0.45 -1.39 -0.74 -0.02 -2.25 0.17 -1.04 -0.18 -0.18 0.62 1.51
- - - 2.16 - - - - 0.96 0.81 -0.72 - - 1.4 1.41 - -1.14 2.03 -1.29
- - 4.25 - - - - - - - - - - - - - - - -
- - - 4.25 - - - - - - - - - - - - - - -
- - 4.25 - - - - - - - - - - - - - - - -
0.73 -1.74 - -0.3 1.15 1.18 -0.45 -0.11 0.17 0.24 -2.08 - - 2.01 -3.43 -1.55 -0.72 1.07 -1.43
- - 4.25 - - - - - - - - - - - - - - - -
0.41 -0.13 -0.76 1.11 0.51 1.19 0.33 0.55 0.57 0.7 -1.93 -0.72 -1.03 -0.15 -1.53 -1.82 -0.42 -0.61 -2.58
- - - 3.39 - - 2.7 - - -1.04 -1.44 - -2.16 - - -0.04 - - -
- - 1.57 1.99 1.66 1.44 0.39 - - 0.27 - - - - - - -7.03 1.4 0.06
1.29 - - 3.27 - - - - - - 1.19 -0.86 - 0.76 -0.61 - 0.07 - -0.61
1.92 - - 3.93 - - - - - - - - - - - - - - -
- - - 0.6 0.57 - - - - 1.95 2.25 - - 0.58 - - - 1.03 1.94
- - 1.85 2.61 - 2.01 0.68 - - - - - -0.6 -2.1 - - 0.5 -0.4 -0.72
- - - 2.42 0.4 2.05 0.82 - 0.44 1.81 -3.1 - - -1.49 - -2.31 - - -0.21
- 1.52 -2.06 3.04 - - 1.69 -0.2 -0.73 1.03 - -1.46 -3.09 -1.68 - - - - -2.97
- - 4.25 - - - - - - - - - - - - - - - -
- - 4.25 - - - - - - - - - - - - - - - -
- - - 3.25 - - - - - - - - 1.02 - - - - 1.39 2.27
- 0.14 - 2.97 -0.45 - - - 0.96 2.73 - -2.05 - - - - - - -1.04
- - 4.25 - - - - - - - - - - - - - - - -
- 1.7 -0.45 3.15 - - - - - - -1.92 - - -3.44 - -0.29 - -2.6 2.25
- - 1.06 1.81 - 1.22 -0.08 -0.25 -0.04 1.03 -0.2 - -0.0 -0.62 -1.68 -0.65 -1.22 0.9 -0.96
- - - 2.93 - - 0.82 0.8 - 2.05 -1.51 - - - - - - - 1.75
- 1.66 1.9 2.41 0.57 -1.18 - - -0.5 0.05 -0.43 -2.14 -3.53 -2.81 -0.4 -1.11 -0.94 -4.15 -3.04
- - 3.12 1.08 - - 2.19 - 1.22 - - -2.81 - -1.72 - -1.78 - -0.81 -
- - - 3.04 - - - - 0.72 0.79 0.41 - -6.03 0.86 - 1.45 -0.64 -0.22 -
- - - 4.25 - - - - - - - - - - - - - - -
- - -0.32 -1.5 - 0.74 - - 0.06 2.16 0.87 - -0.19 0.05 -0.49 -1.34 0.74 -0.12 1.68
- - - 3.31 - - - - 0.86 - 0.76 - -0.58 -0.45 0.27 -0.22 - 0.95 -2.48
- - 0.26 2.16 -0.92 - - 1.41 - 2.15 -2.59 - - -3.14 -0.51 0.64 -0.73 1.23 -2.14
- - - 3.55 - - - - - - 0.8 - 0.67 - - - 2.0 - -
- 0.85 1.73 3.06 - - - 1.46 - 0.03 0.55 - - - - - - -1.82 -
- 0.62 0.06 2.07 - - 0.32 0.23 - 0.26 0.75 - -2.27 -0.38 -0.6 0.55 -0.43 0.48 0.74
0.89 -1.41 - - 2.21 1.68 -0.91 -1.03 -0.16 -0.52 -4.55 - - -1.0 -1.31 -1.13 -0.59 -0.3 1.78
- - 1.99 2.62 - -1.97 -1.47 - - -1.22 - -0.5 -3.49 0.49 -0.21 - -0.21 1.58 -0.14
-0.37 0.95 0.13 -0.74 0.66 0.95 -0.66 -0.11 -1.93 0.33 -0.63 0.13 -1.17 0.88 -0.3 -0.78 -0.6 0.51 -0.99
- - 1.31 2.55 -0.14 - 0.16 -0.04 0.49 1.03 - - - 0.66 - - 0.45 -0.34 -1.09
- - 4.25 - - - - - - - - - - - - - - - -
- - - 3.4 - 2.64 - - - - - - - -0.72 - - - - 0.67
- - 4.25 - - - - - - - - - - - - - - - -
- -0.96 1.22 2.5 0.65 -0.26 0.27 - 0.06 1.75 - -1.13 - -0.18 -2.91 - -0.68 -1.32 -
- - - 3.06 - - - - - - 0.93 - - 2.34 - - 1.19 - 0.47
- - - 2.42 - - - - - 2.38 - - - 1.59 - 0.08 -1.0 - 1.96
- - - 2.91 - - - - - 1.4 - - - 2.31 - 1.23 - 0.63 -
- - - 3.5 - - - - - 2.95 - - - - - - - - -
- - - 4.25 - - - - - - - - - - - - - - -
-1.65 0.13 - 1.61 1.65 2.31 -0.62 -2.5 0.09 - -0.4 - -1.13 -1.03 - -2.64 0.76 -0.74 -1.35
- - - 3.41 - - 3.07 - - - - - - - - - - - -
- - 3.77 - - - - 0.28 - - - - - 0.11 0.71 - -1.5 -1.41 -0.51
- - 3.76 - - - - - - - - - - - - - - - 2.45
- - 1.62 2.22 -0.27 -0.55 - - -0.51 2.03 -1.12 - - -0.02 0.44 -1.52 -0.83 0.32 -
- - - 3.89 - - - - - - - - - - - - - 2.05 -
- - - 2.89 - - - - - - - - -0.04 2.4 2.04 - - - 0.28
- - - 2.26 - 2.13 - - - - 1.4 - - - - - - 2.84 -
0.78 - 0.64 3.02 - - - 1.41 - 1.05 -1.47 -0.88 - 0.57 - - - -0.97 -
-1.61 -0.19 1.86 2.8 0.66 -0.54 - - -1.46 - -0.34 - - -1.5 -0.95 -0.81 0.46 -3.49 -0.19
- - - 4.17 - - - - - - - - - -1.27 - -1.65 - -1.66 -
- - 1.67 0.9 - -0.88 - 1.08 1.04 1.83 - - -0.62 -3.08 - 0.73 -1.25 1.19 -0.85
- - 1.28 2.51 - - - -0.11 - 2.33 -1.11 - - 1.54 - - -2.14 0.4 -
- - - 4.25 - - - - - - - - - - - - - - -
- - 4.09 - - - - - - - - - - -0.35 - - - 0.26 -
- - 4.25 - - - - - - - - - - - - - - - -
- - - 3.36 - - - - - - - 1.52 - 1.71 - - 1.39 - -
- - - 1.98 - - - - - - 1.93 - 0.53 1.72 -1.28 0.32 0.46 0.99 0.58
- - 4.25 - - - - - - - - - - - - - - - -
- - - 4.13 -6.01 - -5.12 - - 0.26 - - -1.7 - - - - - -
- - - 3.86 - 2.15 - - - - - - - - - - - - -
- - 4.25 - - - - - - - - - - - - - - - -
- - - 4.05 - - - - - - -1.32 -0.7 0.5 - - - - - -
- - - 2.74 1.35 - 0.7 -1.18 -0.58 1.8 -2.02 - - -1.98 -0.66 -0.3 -0.29 - -0.28
- 1.55 - 2.51 - -0.2 - - - 0.19 -1.38 -0.38 - 1.61 -0.14 - 0.82 0.57 -
- - - 3.94 - - - - - - - - - - - - 1.25 0.33 -
- -0.07 -0.19 2.82 -0.07 2.14 - - - 0.37 - - -1.66 0.8 - - -0.12 - -1.02
- - - 4.25 - - - - - - - - - - - - - - -
- - - 4.25 - - - - - - - - - - - - - - -
0.44 - 1.19 1.52 - 2.67 -0.51 - - - - -1.17 - -0.25 0.34 -1.39 -1.09 0.25 -0.31
- - - 2.13 - 1.11 - - -0.36 2.74 -3.08 - - - 0.52 -2.04 -0.82 1.4 -
- - - 2.62 - - - - 0.9 - 0.94 1.2 -1.89 0.72 1.18 -0.28 -0.37 -0.02 -
- - - 3.26 - - - -6.44 -3.36 0.86 1.5 -1.58 -1.15 - - 0.46 - - 1.31
-6.88 - - 3.5 - - 1.14 - - - - - -19.88 - - - - 2.39 -2.27
- - 4.25 - - - - - - - - - - - - - - - -
- - - 4.25 - - - - - - - - - - - - - - -
- - 4.25 - - - - - - - - - - - - - - - -
0.72 -3.93 - 1.62 0.51 2.15 0.46 0.65 - - 2.17 -4.26 - - - - -0.65 - -2.23
-0.29 1.44 - -0.41 0.26 -0.66 - - 0.36 0.48 0.03 - -0.53 0.96 -0.33 1.35 -0.16 -1.16 0.9

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.