Heatmap: Cluster_12 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Diurnal Dark 2h
Diurnal Dark 6h
Diurnal Light 2h
Diurnal Light 6h
Diurnal Light 10h
Diurnal Light 14h
20°C Liquid
4°C Liquid
20°C Desiccation
4°C Desiccation
20°C plate
CadmiumCl 250 µM, 24h
Dark, 24h
HL (900 µmol photons m-2 s-1, 1 h)
Cold (4°C )+ HL: 900 µmol photons m-2 s-1, 1h
Mannitol 300 mM,24h
NaCl 150 mM, 24h
UV (exactly 385 nm, 1400 µW/cm2, 1h)
pH = 9, 24h
-0.54 - 0.8 - 1.46 1.42 - - -1.25 -0.15 -3.87 3.13 -4.32 -1.6 -3.28 -1.97 -2.88 -3.15 -5.07
-0.44 -0.53 -0.73 -3.94 0.63 2.35 -1.2 -1.07 -1.41 - -0.78 2.02 -2.66 -0.56 -0.56 -1.09 -0.11 -0.65 -0.33
-0.71 -0.95 -0.91 -0.68 -0.0 0.59 -0.32 -0.82 -0.13 - -0.46 2.83 -0.06 - -0.7 -0.28 -0.39 -0.56 -1.83
-0.52 - -1.19 -2.61 -0.94 -2.63 -3.64 -0.89 - -1.6 0.17 2.84 -1.9 -0.55 -0.07 0.51 0.63 0.34 0.73
- - - - - - - - - - 0.86 3.61 - 1.39 - - 1.23 - -
-0.16 0.41 -1.7 -2.35 -1.04 -0.7 -2.1 -0.48 -2.33 -1.99 -0.26 1.88 -4.64 1.19 -0.09 1.2 0.76 0.45 -0.6
- -2.62 -2.76 -2.76 -0.09 -1.64 - -2.57 - -0.59 -0.3 2.9 -0.96 0.38 0.51 -0.09 0.34 0.32 0.58
-1.43 -2.48 - -1.17 -1.7 -0.32 - - - - -1.37 3.49 -1.47 -4.0 - -3.46 1.59 0.74 -3.23
- - -29.7 - - - -0.72 - 0.86 -0.14 -5.88 2.66 -0.23 0.49 - 1.31 0.2 1.74 -3.62
-2.41 -1.86 -1.4 -1.74 -1.52 -0.8 0.28 -0.53 0.94 -1.53 0.09 0.3 0.24 0.91 0.95 0.76 0.07 0.52 0.4
-0.6 -0.78 - -0.84 0.79 0.45 -1.02 -0.35 -0.49 -0.19 -0.34 0.79 -1.78 0.0 0.44 0.8 0.52 0.96 -0.09
- - - - - - - - - - - 2.29 - 1.33 - 2.46 2.61 - -
- - - - - - - -0.75 0.07 -1.24 -2.94 2.99 1.28 -1.21 -2.82 1.1 0.76 -0.07 0.12
- 0.28 - - - - - - - - -1.18 2.53 -0.37 0.61 -0.49 0.89 1.69 1.16 0.3
- - -0.82 - - - - -1.51 - 1.32 -4.01 3.78 - -0.79 -2.26 -0.12 -3.82 - -
- - 3.13 - - - - - - - - 3.36 - - - - - - -
- - - - - - - - - 1.2 - 3.65 - 0.12 1.24 -1.89 -1.11 - -
- - - - - - - - - - 1.21 4.03 - -1.72 - - - - -
- - - - - - - - - - - 4.25 - - - - - - -
-1.21 -2.97 -2.45 -0.89 -1.12 0.16 -2.79 -0.67 -1.58 -0.71 0.22 1.72 -0.15 0.1 0.18 0.79 1.01 0.45 0.81
- - - - - - - -0.06 1.4 - - 3.44 - -0.37 - - 1.92 - -
- - -0.02 - -0.35 -1.77 - -2.37 -1.91 - -1.74 3.05 - 0.7 0.13 -0.89 -0.43 1.66 -0.47
- - - - - - 1.33 - 0.36 - -0.63 2.58 -0.36 -0.01 0.57 0.96 1.4 - -0.46
- - - - - - - - - - - 4.13 0.18 -2.22 - - - - -3.03
- - - - - - - - - 1.52 - 3.98 - -1.58 - - - - -
-1.62 -0.26 - -1.93 0.29 -0.35 -0.65 -0.45 -2.08 -2.0 0.49 1.26 -1.13 0.49 0.26 1.58 0.67 0.65 -0.52
- - - 1.53 - - -0.38 - - - - 3.65 1.23 - - - - -1.49 -2.87
- -27.27 -17.92 -15.3 - - - - -12.56 -0.42 - 3.7 -14.7 -2.26 -0.8 0.5 -1.91 0.24 0.7
-0.94 - - -1.32 -0.87 0.18 - -1.37 0.68 - -3.04 2.65 -1.39 0.04 -3.55 1.55 0.47 1.09 -3.75
-1.33 -0.53 - - - -2.68 -2.16 -0.07 -1.74 0.94 -1.81 3.41 -4.16 -4.53 -0.41 0.08 0.01 -2.11 -1.62
- - - - - - - - - - - 4.06 - - - - 1.2 - -
- - - - - 1.67 -0.82 - - - -12.77 3.24 1.55 - -1.26 -0.35 -2.52 0.17 -1.38
- - - - - - - - - - 0.45 4.14 - - - - - - -
-0.61 -0.04 - - - -2.05 - - -2.62 - -2.47 3.59 1.09 -2.17 -3.53 -0.83 -2.2 -1.0 0.03
- - -0.84 - - 0.02 -2.21 -1.5 - 0.18 -0.83 1.0 -3.51 0.58 -0.08 2.37 2.05 -0.53 -0.68
-1.47 -2.02 -2.68 -1.07 -2.74 -2.07 -4.21 -4.41 -1.85 -0.83 -0.77 2.45 1.06 0.59 0.27 2.43 -9.86 -3.27 -3.35
-26.98 -24.77 - - -27.04 - - -23.57 -22.03 -23.75 0.88 1.73 -1.7 1.16 1.51 1.94 0.62 1.52 -2.34
-2.27 -2.01 -2.55 -1.54 -3.28 -1.72 -2.26 -4.04 -2.23 -0.64 -0.8 2.65 -0.25 -0.86 0.21 0.6 0.92 0.99 0.77
- - -0.62 -0.1 - - -1.77 -0.96 -0.48 1.29 -2.74 1.7 - 0.5 -0.01 1.87 1.86 -1.48 -
- - - - - - - - - 1.27 - 4.0 - - - - - -0.62 -
- 0.07 - -21.73 - - - - - - -6.22 4.11 -7.44 -5.19 -12.1 -9.24 -5.98 -0.83 -
- -2.21 - - - -1.5 - - - -1.78 1.42 2.27 -4.13 1.14 -0.03 1.5 1.02 0.91 -0.61
- - - - - - - - - - - 4.25 - - - - - - -
- - - - - 2.65 -1.02 0.82 -0.69 - - 3.3 - - - - - - -
- - - - - - - 1.18 - - -0.69 2.18 -2.6 0.56 1.05 1.88 1.09 0.76 -1.39
- - -1.2 -0.94 - - - -0.85 -19.16 -3.05 -3.2 2.81 -4.94 -1.61 1.03 2.15 0.23 1.06 -2.68
- - - - - - - - - - - 3.55 - 0.47 - - 2.16 -0.04 -1.1
- 0.5 -0.55 - -4.86 - - -4.49 -0.95 - -2.11 2.83 -3.19 -1.06 0.06 1.06 0.62 0.8 0.98
- - - - - - -2.22 -1.3 1.49 - 0.87 1.05 -0.82 0.32 1.42 1.43 0.74 1.2 -0.9
- - - - - -1.32 1.05 0.35 - -1.07 - 3.83 - - - - - -1.13 -2.83
- -0.86 - - 0.61 - -0.91 - - - -1.45 3.47 -2.81 -1.06 - 0.63 0.43 0.21 -1.83
- -1.9 - -2.13 - - - - - - -0.52 2.77 -0.92 0.37 -0.4 1.52 0.97 -0.11 1.4
- - - -0.43 - - - 1.64 - - -1.15 2.67 - -0.14 0.53 1.38 0.95 -0.58 -0.35
- - - - - -10.28 - - 1.94 - -17.54 3.61 - - - -31.31 - 1.15 -0.47
- - -1.18 - - -1.65 0.18 -1.28 0.03 0.37 0.9 2.52 - 0.09 1.06 -0.24 -2.19 -0.37 0.85
- - 2.5 - - - - - - - - 3.67 - - - -0.67 - - -
1.12 - - -0.11 - - -0.9 -0.17 - -1.01 -1.66 2.68 -2.74 -0.46 -0.18 1.49 -1.1 0.78 -1.01
- - - - - - - - - - - 3.45 - - - 3.02 - - -
-1.13 - -3.85 - -2.46 - -2.11 -2.18 1.8 0.99 -3.62 3.12 -0.82 -1.29 -1.13 -0.27 -1.95 -0.17 -2.54
- - -1.49 - - -1.66 - - -0.75 - 0.32 3.04 -0.93 -0.09 -2.0 0.85 0.84 0.91 0.07
-1.39 -1.63 -0.98 -1.37 0.1 -0.1 -1.0 -1.51 -0.82 - -0.0 2.14 -0.61 0.96 -0.01 0.45 0.32 0.15 0.33
- - - - - - - - - 2.34 - 3.49 - 1.42 - - - - -
- - - - - - - - - - -0.28 3.07 - 1.28 - 2.32 - - 1.23
- - - - - - - - - - - 3.66 - -0.57 - 1.54 - 1.47 -
- - - - - - - - - - - 3.72 2.04 -0.03 - - -0.48 - -
- - - - - - - - - - -0.22 3.74 - 0.93 -0.02 -1.73 - 0.69 -
- - - - - - - - - 0.53 0.52 2.59 - 0.54 -1.66 2.59 0.42 -1.07 -0.98
- - - - - - - - - - - 4.25 - - - - - - -
-2.89 - -2.4 - - - - - - -3.09 -1.02 2.74 -1.53 -0.43 0.51 1.51 0.59 1.31 1.02
- - - 1.33 - - - - - 0.17 - 3.33 - -2.76 -1.82 0.12 -0.5 1.46 -1.6
- - - - - - - - - -0.89 -1.66 2.96 -1.32 -0.39 0.65 1.4 1.34 0.62 -0.13
-1.19 -1.6 -0.63 -1.72 -2.28 -0.79 -1.8 -1.98 -3.8 -2.81 0.58 1.83 -0.7 -0.09 0.76 0.59 1.01 0.4 1.38
0.47 - 1.19 - - 2.14 - - - - -3.16 2.92 - -1.29 - -2.59 0.56 -2.54 0.01
- -0.49 1.39 0.11 -1.61 -0.3 - - - - - 3.39 0.45 - - - - - 0.67

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.