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  5. AT2G40610

AT2G40610


Description : expansin A8


Gene families : OG_01_0000011 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G40610
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AT1G12560 No alias expansin A7 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G62980 No alias expansin A18 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G02260 No alias expansin A9 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56320 No alias expansin A14 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22700.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g24230.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_20360V3.1 No alias expansin A9 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_19690V3.1 No alias expansin A16 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_19720V3.1 No alias expansin A1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0006949 syncytium formation IEP Interproscan
BP GO:0009826 unidimensional cell growth ISS Interproscan
BP GO:0009826 unidimensional cell growth NAS Interproscan
BP GO:0009828 plant-type cell wall loosening ISS Interproscan
BP GO:0009828 plant-type cell wall loosening NAS Interproscan
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000036 acyl carrier activity IEP HCCA
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004452 isopentenyl-diphosphate delta-isomerase activity IEP HCCA
MF GO:0005275 amine transmembrane transporter activity IEP HCCA
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006567 threonine catabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009531 secondary cell wall IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009645 response to low light intensity stimulus IEP HCCA
BP GO:0009650 UV protection IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
CC GO:0009986 cell surface IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010114 response to red light IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015140 malate transmembrane transporter activity IEP HCCA
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0016098 monoterpenoid metabolic process IEP HCCA
BP GO:0016099 monoterpenoid biosynthetic process IEP HCCA
MF GO:0016297 acyl-[acyl-carrier-protein] hydrolase activity IEP HCCA
CC GO:0016328 lateral plasma membrane IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022622 root system development IEP HCCA
BP GO:0030308 negative regulation of cell growth IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032875 regulation of DNA endoreduplication IEP HCCA
BP GO:0032876 negative regulation of DNA endoreduplication IEP HCCA
BP GO:0032877 positive regulation of DNA endoreduplication IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
MF GO:0034007 S-linalool synthase activity IEP HCCA
MF GO:0034768 (E)-beta-ocimene synthase activity IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0043692 monoterpene metabolic process IEP HCCA
BP GO:0043693 monoterpene biosynthetic process IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0044620 ACP phosphopantetheine attachment site binding IEP HCCA
BP GO:0045740 positive regulation of DNA replication IEP HCCA
BP GO:0046246 terpene biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048766 root hair initiation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
MF GO:0050551 myrcene synthase activity IEP HCCA
BP GO:0050829 defense response to Gram-negative bacterium IEP HCCA
MF GO:0051192 prosthetic group binding IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071423 malate transmembrane transport IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0080027 response to herbivore IEP HCCA
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090068 positive regulation of cell cycle process IEP HCCA
BP GO:0090329 regulation of DNA-dependent DNA replication IEP HCCA
BP GO:0090393 sepal giant cell development IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
MF GO:0140414 phosphopantetheine-dependent carrier activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:2000012 regulation of auxin polar transport IEP HCCA
BP GO:2000038 regulation of stomatal complex development IEP HCCA
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP HCCA
BP GO:2000105 positive regulation of DNA-dependent DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 161 239
IPR009009 RlpA-like_DPBB 65 149
PLAZA 3.0 Dicots AT2G40610