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AT2G43810


Description : Small nuclear ribonucleoprotein family protein


Gene families : OG_01_0003325 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G43810
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cre03.g151750 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000785 chromatin IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006333 chromatin assembly or disassembly IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0016925 protein sumoylation IEP HCCA
MF GO:0030527 structural constituent of chromatin IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0048766 root hair initiation IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 17 81
PLAZA 3.0 Dicots AT2G43810