AT1G13980


Description : sec7 domain-containing protein


Gene families : OG_01_0001922 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001922_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G13980
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
Mp3g25100.1 No alias GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_11320V3.1 No alias sec7 domain-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_6150V3.1 No alias sec7 domain-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_11830V3.1 No alias sec7 domain-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation IMP Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
BP GO:0001736 establishment of planar polarity IGI Interproscan
BP GO:0003002 regionalization RCA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005737 cytoplasm IBA Interproscan
CC GO:0005768 endosome IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006094 gluconeogenesis RCA Interproscan
BP GO:0006897 endocytosis IMP Interproscan
BP GO:0007010 cytoskeleton organization RCA Interproscan
BP GO:0007062 sister chromatid cohesion RCA Interproscan
BP GO:0007155 cell adhesion IMP Interproscan
BP GO:0007155 cell adhesion RCA Interproscan
BP GO:0009793 embryo development ending in seed dormancy IMP Interproscan
BP GO:0009793 embryo development ending in seed dormancy RCA Interproscan
BP GO:0009826 unidimensional cell growth IMP Interproscan
BP GO:0009880 embryonic pattern specification IMP Interproscan
BP GO:0009880 embryonic pattern specification RCA Interproscan
BP GO:0009887 animal organ morphogenesis RCA Interproscan
BP GO:0009888 tissue development RCA Interproscan
BP GO:0009942 longitudinal axis specification IMP Interproscan
BP GO:0010014 meristem initiation RCA Interproscan
BP GO:0010072 primary shoot apical meristem specification RCA Interproscan
BP GO:0010087 phloem or xylem histogenesis IMP Interproscan
BP GO:0010090 trichome morphogenesis RCA Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Interproscan
MF GO:0010292 GTP:GDP antiporter activity IGI Interproscan
BP GO:0010311 lateral root formation IMP Interproscan
BP GO:0010431 seed maturation RCA Interproscan
BP GO:0010498 proteasomal protein catabolic process RCA Interproscan
BP GO:0010540 basipetal auxin transport IMP Interproscan
BP GO:0010638 positive regulation of organelle organization RCA Interproscan
BP GO:0016049 cell growth RCA Interproscan
BP GO:0016192 vesicle-mediated transport IMP Interproscan
BP GO:0030244 cellulose biosynthetic process RCA Interproscan
BP GO:0032509 endosome transport via multivesicular body sorting pathway IMP Interproscan
BP GO:0033043 regulation of organelle organization RCA Interproscan
BP GO:0033044 regulation of chromosome organization RCA Interproscan
MF GO:0042803 protein homodimerization activity IPI Interproscan
BP GO:0045010 actin nucleation RCA Interproscan
BP GO:0045595 regulation of cell differentiation RCA Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
BP GO:0048209 regulation of vesicle targeting, to, from or within Golgi TAS Interproscan
BP GO:0048449 floral organ formation RCA Interproscan
BP GO:0048589 developmental growth RCA Interproscan
BP GO:0048765 root hair cell differentiation IGI Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
BP GO:0050790 regulation of catalytic activity IBA Interproscan
BP GO:0051049 regulation of transport RCA Interproscan
BP GO:0051301 cell division RCA Interproscan
BP GO:0071555 cell wall organization IMP Interproscan
BP GO:0071555 cell wall organization RCA Interproscan
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004532 exoribonuclease activity IEP HCCA
MF GO:0004534 5'-3' exoribonuclease activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005034 osmosensor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006611 protein export from nucleus IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008409 5'-3' exonuclease activity IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009636 response to toxic substance IEP HCCA
MF GO:0009884 cytokinin receptor activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010205 photoinhibition IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010271 regulation of chlorophyll catabolic process IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010586 miRNA metabolic process IEP HCCA
BP GO:0010587 miRNA catabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010959 regulation of metal ion transport IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0031048 heterochromatin assembly by small RNA IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
BP GO:0031537 regulation of anthocyanin metabolic process IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034661 ncRNA catabolic process IEP HCCA
BP GO:0034756 regulation of iron ion transport IEP HCCA
BP GO:0034757 negative regulation of iron ion transport IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0043155 negative regulation of photosynthesis, light reaction IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0043271 negative regulation of ion transport IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0043424 protein histidine kinase binding IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0051051 negative regulation of transport IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051177 meiotic sister chromatid cohesion IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051316 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation IEP HCCA
BP GO:0051455 monopolar spindle attachment to meiosis I kinetochore IEP HCCA
BP GO:0051754 meiotic sister chromatid cohesion, centromeric IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070417 cellular response to cold IEP HCCA
BP GO:0070601 centromeric sister chromatid cohesion IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0071215 cellular response to abscisic acid stimulus IEP HCCA
BP GO:0071396 cellular response to lipid IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0080117 secondary growth IEP HCCA
BP GO:0080190 lateral growth IEP HCCA
BP GO:0090056 regulation of chlorophyll metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097306 cellular response to alcohol IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP HCCA
BP GO:1901404 regulation of tetrapyrrole catabolic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1905156 negative regulation of photosynthesis IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR000904 Sec7_dom 562 745
IPR032691 Sec7_N 317 476
PLAZA 3.0 Dicots AT1G13980