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AT3G43980


Description : Ribosomal protein S14p/S29e family protein


Gene families : OG_01_0002150 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G43980
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Cre08.g358556 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g15120.1 No alias component RPS29 of SSU proteome 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g03910.1 No alias component RPS29 of SSU proteome 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_10190V3.1 No alias Ribosomal protein S14p/S29e family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_6730V3.1 No alias Ribosomal protein S14p/S29e family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Interproscan
CC GO:0005840 ribosome ISS Interproscan
BP GO:0006412 translation ISS Interproscan
CC GO:0022627 cytosolic small ribosomal subunit IDA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0007163 establishment or maintenance of cell polarity IEP HCCA
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009853 photorespiration IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
CC GO:0031209 SCAR complex IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001209 Ribosomal_S14 7 56
PLAZA 3.0 Dicots AT3G43980