AT3G48150

Description : anaphase-promoting complex subunit 8

Gene families : OG_01_0006053 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006053_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G48150
Cluster	HCCA: Cluster_228

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre16.g681578	No alias	Cell cycle.mitosis and meiosis.metaphase to anaphase...	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_17870V3.1	No alias	anaphase-promoting complex subunit 8	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0001558	regulation of cell growth	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-dependent DNA replication	None	Extended
BP	GO:0006275	regulation of DNA replication	None	Extended
BP	GO:0007276	gamete generation	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009560	embryo sac egg cell differentiation	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	IMP	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032875	regulation of DNA endoreduplication	RCA	Interproscan
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042023	DNA endoreduplication	RCA	Interproscan
BP	GO:0042991	obsolete transcription factor import into nucleus	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044786	cell cycle DNA replication	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051302	regulation of cell division	RCA	Interproscan
BP	GO:0051510	regulation of unidimensional cell growth	RCA	Interproscan
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0090329	regulation of DNA-dependent DNA replication	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
BP	GO:0000280	nuclear division	IEP	HCCA
CC	GO:0000502	proteasome complex	IEP	HCCA
BP	GO:0001708	cell fate specification	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003684	damaged DNA binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
MF	GO:0004161	dimethylallyltranstransferase activity	IEP	HCCA
MF	GO:0004337	geranyltranstransferase activity	IEP	HCCA
MF	GO:0004659	prenyltransferase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004709	MAP kinase kinase kinase activity	IEP	HCCA
MF	GO:0005261	cation channel activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	IEP	HCCA
CC	GO:0005849	mRNA cleavage factor complex	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006268	DNA unwinding involved in DNA replication	IEP	HCCA
BP	GO:0006312	mitotic recombination	IEP	HCCA
BP	GO:0006378	mRNA polyadenylation	IEP	HCCA
BP	GO:0006379	mRNA cleavage	IEP	HCCA
BP	GO:0006406	mRNA export from nucleus	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006626	protein targeting to mitochondrion	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006839	mitochondrial transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007000	nucleolus organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0008283	cell population proliferation	IEP	HCCA
CC	GO:0008540	proteasome regulatory particle, base subcomplex	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
CC	GO:0009544	chloroplast ATP synthase complex	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
BP	GO:0009640	photomorphogenesis	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0009957	epidermal cell fate specification	IEP	HCCA
BP	GO:0010072	primary shoot apical meristem specification	IEP	HCCA
BP	GO:0010074	maintenance of meristem identity	IEP	HCCA
BP	GO:0010099	regulation of photomorphogenesis	IEP	HCCA
BP	GO:0010100	negative regulation of photomorphogenesis	IEP	HCCA
BP	GO:0010162	seed dormancy process	IEP	HCCA
BP	GO:0010431	seed maturation	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	HCCA
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
BP	GO:0016569	obsolete covalent chromatin modification	IEP	HCCA
BP	GO:0016572	histone phosphorylation	IEP	HCCA
CC	GO:0016604	nuclear body	IEP	HCCA
CC	GO:0016607	nuclear speck	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0022611	dormancy process	IEP	HCCA
BP	GO:0030865	cortical cytoskeleton organization	IEP	HCCA
BP	GO:0031122	cytoplasmic microtubule organization	IEP	HCCA
BP	GO:0031123	RNA 3'-end processing	IEP	HCCA
BP	GO:0031124	mRNA 3'-end processing	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0032392	DNA geometric change	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032508	DNA duplex unwinding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034613	cellular protein localization	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0043622	cortical microtubule organization	IEP	HCCA
BP	GO:0043631	RNA polyadenylation	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0045337	farnesyl diphosphate biosynthetic process	IEP	HCCA
BP	GO:0045338	farnesyl diphosphate metabolic process	IEP	HCCA
BP	GO:0045595	regulation of cell differentiation	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0051028	mRNA transport	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0070585	protein localization to mitochondrion	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	HCCA
BP	GO:0080009	mRNA methylation	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:0090421	embryonic meristem initiation	IEP	HCCA
BP	GO:0090501	RNA phosphodiester bond hydrolysis	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA
CC	GO:1905369	endopeptidase complex	IEP	HCCA
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	HCCA
BP	GO:2000030	regulation of response to red or far red light	IEP	HCCA
BP	GO:2000067	regulation of root morphogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019734	TPR_repeat	340	371
IPR007192	APC8	7	159
IPR019734	TPR_repeat	479	507

External Links

PLAZA 3.0 Dicots	AT3G48150

AT3G48150

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation