AT3G48570

Description : secE/sec61-gamma protein transport protein

Gene families : OG_01_0002339 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002339_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G48570
Cluster	HCCA: Cluster_25

Target	Alias	Description	ECC score	Gene Family Method
Cre16.g680230	No alias	Protein translocation.endoplasmic...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g00820.1	No alias	subunit gamma of co-translational insertion system Sec61...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_17670V3.1	No alias	secE/sec61-gamma protein transport protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_13150V3.1	No alias	secE/sec61-gamma protein transport protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_3570V3.1	No alias	secE/sec61-gamma protein transport protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_26940V3.1	No alias	secE/sec61-gamma protein transport protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006605	protein targeting	ISS	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006865	amino acid transport	RCA	Interproscan
BP	GO:0006886	intracellular protein transport	ISS	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015804	neutral amino acid transport	None	Extended
BP	GO:0015824	proline transport	RCA	Interproscan
BP	GO:0015849	organic acid transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0046942	carboxylic acid transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0004129	cytochrome-c oxidase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005740	mitochondrial envelope	IEP	HCCA
CC	GO:0005747	mitochondrial respiratory chain complex I	IEP	HCCA
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
CC	GO:0005753	mitochondrial proton-transporting ATP synthase complex	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA
MF	GO:0008121	ubiquinol-cytochrome-c reductase activity	IEP	HCCA
MF	GO:0008324	cation transmembrane transporter activity	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0009853	photorespiration	IEP	HCCA
MF	GO:0015075	ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
CC	GO:0015935	small ribosomal subunit	IEP	HCCA
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	HCCA
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
CC	GO:0022627	cytosolic small ribosomal subunit	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active ion transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
CC	GO:0030964	NADH dehydrogenase complex	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043094	cellular metabolic compound salvage	IEP	HCCA
BP	GO:0043603	cellular amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
CC	GO:0045259	proton-transporting ATP synthase complex	IEP	HCCA
CC	GO:0045271	respiratory chain complex I	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
BP	GO:0051418	microtubule nucleation by microtubule organizing center	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001901	Translocase_SecE/Sec61-g	13	65

External Links

PLAZA 3.0 Dicots	AT3G48570

AT3G48570

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation