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AT3G55140


Description : Pectin lyase-like superfamily protein


Gene families : OG_01_0009929 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G55140
Cluster HCCA: Cluster_145


Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
MF GO:0016829 lyase activity ISS Interproscan
MF GO:0030570 pectate lyase activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000266 mitochondrial fission IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
BP GO:0000913 preprophase band assembly IEP HCCA
MF GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0007005 mitochondrion organization IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0008793 aromatic-amino-acid:2-oxoglutarate aminotransferase activity IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009641 shade avoidance IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010078 maintenance of root meristem identity IEP HCCA
MF GO:0010326 methionine-oxo-acid transaminase activity IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0034248 regulation of cellular amide metabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0044375 regulation of peroxisome size IEP HCCA
MF GO:0047312 L-phenylalanine:pyruvate aminotransferase activity IEP HCCA
MF GO:0047635 alanine-oxo-acid transaminase activity IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
MF GO:0050048 L-leucine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0070529 L-tryptophan aminotransferase activity IEP HCCA
MF GO:0070546 L-phenylalanine aminotransferase activity IEP HCCA
MF GO:0070547 L-tyrosine aminotransferase activity IEP HCCA
MF GO:0070548 L-glutamine aminotransferase activity IEP HCCA
BP GO:0080022 primary root development IEP HCCA
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP HCCA
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP HCCA
MF GO:0080098 L-tyrosine:pyruvate aminotransferase activity IEP HCCA
MF GO:0080099 L-methionine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0080100 L-glutamine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0080130 L-phenylalanine:2-oxoglutarate aminotransferase activity IEP HCCA
BP GO:0080178 5-carbamoylmethyl uridine residue modification IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR002022 Pec_lyase 74 237
PLAZA 3.0 Dicots AT3G55140