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AT4G00893


Description : unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12370.1); Has 220 Blast hits to 215 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG_01_0001268 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G00893
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT3G18720 No alias F-box family protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G10660 No alias CDC68-related 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G10700 No alias BEST Arabidopsis thaliana protein match is:... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0005253 anion channel activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
MF GO:0008308 voltage-gated anion channel activity IEP HCCA
BP GO:0009830 cell wall modification involved in abscission IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0044277 cell wall disassembly IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0080159 zygote elongation IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT4G00893