1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G02290

AT4G02290


Description : glycosyl hydrolase 9B13


Gene families : OG_01_0000030 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G02290
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AT1G64390 No alias glycosyl hydrolase 9C2 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g24780.1 No alias KOR-type cellulose synthase endo-1,4-beta-glucanase 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_27980V3.1 No alias glycosyl hydrolase 9A1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_02466.1 No alias no annotation 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03863.1 No alias no annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0010089 xylem development RCA Interproscan
BP GO:0044036 cell wall macromolecule metabolic process RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009650 UV protection IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0022622 root system development IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
MF GO:0046423 allene-oxide cyclase activity IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051513 regulation of monopolar cell growth IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:2000012 regulation of auxin polar transport IEP HCCA
BP GO:2000038 regulation of stomatal complex development IEP HCCA
BP GO:2000122 negative regulation of stomatal complex development IEP HCCA
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 53 506
PLAZA 3.0 Dicots AT4G02290