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  5. AT4G10570

AT4G10570


Description : ubiquitin-specific protease 9


Gene families : OG_01_0002763 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002763_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10570
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT5G22030 No alias ubiquitin-specific protease 8 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre02.g117850 No alias Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g14190.1 No alias deubiquitinase (UBP5|8-11) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03771.1 No alias deubiquitinase (UBP5/8-11) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
MF GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0000919 cell plate assembly IEP HCCA
BP GO:0001763 morphogenesis of a branching structure IEP HCCA
MF GO:0003730 mRNA 3'-UTR binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004430 1-phosphatidylinositol 4-kinase activity IEP HCCA
MF GO:0004843 thiol-dependent deubiquitinase IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005769 early endosome IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007004 telomere maintenance via telomerase IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
MF GO:0008281 sulfonylurea receptor activity IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010026 trichome differentiation IEP HCCA
BP GO:0010044 response to aluminum ion IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010223 secondary shoot formation IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010235 guard mother cell cytokinesis IEP HCCA
BP GO:0010346 shoot axis formation IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
BP GO:0010833 telomere maintenance via telomere lengthening IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity IEP HCCA
BP GO:0016553 base conversion or substitution editing IEP HCCA
BP GO:0016554 cytidine to uridine editing IEP HCCA
BP GO:0016569 obsolete covalent chromatin modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022610 biological adhesion IEP HCCA
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP HCCA
BP GO:0030007 cellular potassium ion homeostasis IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030276 clathrin binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032876 negative regulation of DNA endoreduplication IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040007 growth IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0043966 histone H3 acetylation IEP HCCA
BP GO:0043967 histone H4 acetylation IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
CC GO:0048471 perinuclear region of cytoplasm IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051177 meiotic sister chromatid cohesion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051316 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation IEP HCCA
BP GO:0051455 monopolar spindle attachment to meiosis I kinetochore IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051754 meiotic sister chromatid cohesion, centromeric IEP HCCA
MF GO:0052742 phosphatidylinositol kinase activity IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055067 monovalent inorganic cation homeostasis IEP HCCA
BP GO:0055070 copper ion homeostasis IEP HCCA
BP GO:0055075 potassium ion homeostasis IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
MF GO:0070273 phosphatidylinositol-4-phosphate binding IEP HCCA
MF GO:0070300 phosphatidic acid binding IEP HCCA
BP GO:0070601 centromeric sister chromatid cohesion IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0070971 endoplasmic reticulum exit site IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0090213 regulation of radial pattern formation IEP HCCA
BP GO:0090332 stomatal closure IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0098772 molecular function regulator IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR006615 Pept_C19_DUSP 43 135
IPR001394 Peptidase_C19_UCH 305 892
PLAZA 3.0 Dicots AT4G10570