AT4G12010

Description : Disease resistance protein (TIR-NBS-LRR class) family

Gene families : OG_01_0000936 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000936_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G12010
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AT4G19510	No alias	Disease resistance protein (TIR-NBS-LRR class)	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44870	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G45200	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G45230	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G45250	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004673	protein histidine kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0005034	osmosensor activity	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006928	movement of cell or subcellular component	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
BP	GO:0009749	response to glucose	IEP	HCCA
MF	GO:0009927	histidine phosphotransfer kinase activity	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010375	stomatal complex patterning	IEP	HCCA
BP	GO:0010431	seed maturation	IEP	HCCA
MF	GO:0015662	P-type ion transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0022610	biological adhesion	IEP	HCCA
BP	GO:0030029	actin filament-based process	IEP	HCCA
BP	GO:0030048	actin filament-based movement	IEP	HCCA
BP	GO:0030154	cell differentiation	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
BP	GO:0043090	amino acid import	IEP	HCCA
BP	GO:0045010	actin nucleation	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0048869	cellular developmental process	IEP	HCCA
BP	GO:0051645	Golgi localization	IEP	HCCA
BP	GO:0051646	mitochondrion localization	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
BP	GO:0060151	peroxisome localization	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140299	small molecule sensor activity	IEP	HCCA
MF	GO:0140358	P-type transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	11	185
IPR011713	Leu-rich_rpt_3	621	640
IPR002182	NB-ARC	197	427
IPR001611	Leu-rich_rpt	855	912

External Links

PLAZA 3.0 Dicots	AT4G12010

AT4G12010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation