AT4G37200

Description : Thioredoxin superfamily protein

Gene families : OG_01_0007093 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007093_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G37200
Cluster	HCCA: Cluster_151

Target	Alias	Description	ECC score	Gene Family Method	Actions
Zci_02618.1	No alias	protein involved in cytochrome b6/f complex assembly (HCF164)	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009534	chloroplast thylakoid	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009579	thylakoid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010190	cytochrome b6f complex assembly	IMP	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016143	S-glycoside metabolic process	None	Extended
BP	GO:0016144	S-glycoside biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	None	Extended
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IDA	Interproscan
BP	GO:0017004	cytochrome complex assembly	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019757	glycosinolate metabolic process	None	Extended
BP	GO:0019758	glycosinolate biosynthetic process	None	Extended
BP	GO:0019760	glucosinolate metabolic process	None	Extended
BP	GO:0019761	glucosinolate biosynthetic process	RCA	Interproscan
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
CC	GO:0031977	thylakoid lumen	IDA	Interproscan
CC	GO:0031984	organelle subcompartment	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901657	glycosyl compound metabolic process	None	Extended
BP	GO:1901659	glycosyl compound biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	IEP	HCCA
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0004021	L-alanine:2-oxoglutarate aminotransferase activity	IEP	HCCA
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004733	pyridoxamine-phosphate oxidase activity	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0005982	starch metabolic process	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
BP	GO:0006081	cellular aldehyde metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
MF	GO:0008422	beta-glucosidase activity	IEP	HCCA
MF	GO:0008453	alanine-glyoxylate transaminase activity	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0008614	pyridoxine metabolic process	IEP	HCCA
BP	GO:0008615	pyridoxine biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0009269	response to desiccation	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
CC	GO:0009368	endopeptidase Clp complex	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009527	plastid outer membrane	IEP	HCCA
CC	GO:0009528	plastid inner membrane	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
BP	GO:0009657	plastid organization	IEP	HCCA
BP	GO:0009658	chloroplast organization	IEP	HCCA
CC	GO:0009706	chloroplast inner membrane	IEP	HCCA
CC	GO:0009707	chloroplast outer membrane	IEP	HCCA
CC	GO:0009840	chloroplastic endopeptidase Clp complex	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0009965	leaf morphogenesis	IEP	HCCA
BP	GO:0010155	regulation of proton transport	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010206	photosystem II repair	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
BP	GO:0010264	myo-inositol hexakisphosphate biosynthetic process	IEP	HCCA
CC	GO:0010287	plastoglobule	IEP	HCCA
BP	GO:0010304	PSII associated light-harvesting complex II catabolic process	IEP	HCCA
MF	GO:0015926	glucosidase activity	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015996	chlorophyll catabolic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0016108	tetraterpenoid metabolic process	IEP	HCCA
BP	GO:0016109	tetraterpenoid biosynthetic process	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
BP	GO:0016116	carotenoid metabolic process	IEP	HCCA
BP	GO:0016117	carotenoid biosynthetic process	IEP	HCCA
BP	GO:0016119	carotene metabolic process	IEP	HCCA
BP	GO:0016120	carotene biosynthetic process	IEP	HCCA
MF	GO:0016166	phytoene dehydrogenase activity	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016719	carotene 7,8-desaturase activity	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
BP	GO:0019252	starch biosynthetic process	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
BP	GO:0030091	protein repair	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
BP	GO:0031279	regulation of cyclase activity	IEP	HCCA
BP	GO:0031647	regulation of protein stability	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0031969	chloroplast membrane	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0032958	inositol phosphate biosynthetic process	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033015	tetrapyrrole catabolic process	IEP	HCCA
BP	GO:0033517	myo-inositol hexakisphosphate metabolic process	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0034762	regulation of transmembrane transport	IEP	HCCA
BP	GO:0034765	regulation of ion transmembrane transport	IEP	HCCA
BP	GO:0042214	terpene metabolic process	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0042816	vitamin B6 metabolic process	IEP	HCCA
BP	GO:0042817	pyridoxal metabolic process	IEP	HCCA
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	HCCA
BP	GO:0043269	regulation of ion transport	IEP	HCCA
BP	GO:0043647	inositol phosphate metabolic process	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044257	cellular protein catabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
BP	GO:0046149	pigment catabolic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0046173	polyol biosynthetic process	IEP	HCCA
BP	GO:0046246	terpene biosynthetic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
MF	GO:0047635	alanine-oxo-acid transaminase activity	IEP	HCCA
MF	GO:0047958	glycine:2-oxoglutarate aminotransferase activity	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0050821	protein stabilization	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
MF	GO:0051743	red chlorophyll catabolite reductase activity	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0080079	cellobiose glucosidase activity	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
BP	GO:1902171	regulation of tocopherol cyclase activity	IEP	HCCA
BP	GO:1904062	regulation of cation transmembrane transport	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013766	Thioredoxin_domain	131	225

External Links

PLAZA 3.0 Dicots	AT4G37200

AT4G37200

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation