Coexpression cluster: Cluster_151 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009536 plastid 84.75% (50/59) 2.62 0.0 0.0
GO:0009507 chloroplast 83.05% (49/59) 2.62 0.0 0.0
GO:0042170 plastid membrane 35.59% (21/59) 4.64 0.0 0.0
GO:0009579 thylakoid 32.2% (19/59) 4.77 0.0 0.0
GO:0005622 intracellular anatomical structure 33.9% (20/59) 4.44 0.0 0.0
GO:0055035 plastid thylakoid membrane 30.51% (18/59) 4.73 0.0 0.0
GO:0009535 chloroplast thylakoid membrane 30.51% (18/59) 4.74 0.0 0.0
GO:0042651 thylakoid membrane 30.51% (18/59) 4.68 0.0 0.0
GO:0034357 photosynthetic membrane 30.51% (18/59) 4.68 0.0 0.0
GO:0010207 photosystem II assembly 25.42% (15/59) 5.32 0.0 0.0
GO:0009657 plastid organization 27.12% (16/59) 4.63 0.0 0.0
GO:0031976 plastid thylakoid 23.73% (14/59) 4.95 0.0 0.0
GO:0009534 chloroplast thylakoid 23.73% (14/59) 4.95 0.0 0.0
GO:0009941 chloroplast envelope 30.51% (18/59) 3.98 0.0 0.0
GO:0009526 plastid envelope 30.51% (18/59) 3.96 0.0 0.0
GO:0031975 envelope 30.51% (18/59) 3.81 0.0 0.0
GO:0031967 organelle envelope 30.51% (18/59) 3.81 0.0 0.0
GO:0034622 cellular protein-containing complex assembly 27.12% (16/59) 4.05 0.0 0.0
GO:0031090 organelle membrane 35.59% (21/59) 3.22 0.0 0.0
GO:0015994 chlorophyll metabolic process 20.34% (12/59) 5.04 0.0 0.0
GO:0065003 protein-containing complex assembly 27.12% (16/59) 3.99 0.0 0.0
GO:0043933 protein-containing complex subunit organization 27.12% (16/59) 3.95 0.0 0.0
GO:0006778 porphyrin-containing compound metabolic process 20.34% (12/59) 4.81 0.0 0.0
GO:0033013 tetrapyrrole metabolic process 20.34% (12/59) 4.8 0.0 0.0
GO:0006098 pentose-phosphate shunt 18.64% (11/59) 4.87 0.0 0.0
GO:0051156 glucose 6-phosphate metabolic process 18.64% (11/59) 4.82 0.0 0.0
GO:0006740 NADPH regeneration 18.64% (11/59) 4.82 0.0 0.0
GO:0006739 NADP metabolic process 18.64% (11/59) 4.79 0.0 0.0
GO:0009987 cellular process 83.05% (49/59) 1.19 0.0 0.0
GO:0008152 metabolic process 74.58% (44/59) 1.38 0.0 0.0
GO:0031984 organelle subcompartment 23.73% (14/59) 3.85 0.0 0.0
GO:0022607 cellular component assembly 27.12% (16/59) 3.39 0.0 0.0
GO:0042440 pigment metabolic process 20.34% (12/59) 4.21 0.0 0.0
GO:0016072 rRNA metabolic process 18.64% (11/59) 4.46 0.0 0.0
GO:0009658 chloroplast organization 18.64% (11/59) 4.46 0.0 0.0
GO:0006364 rRNA processing 18.64% (11/59) 4.47 0.0 0.0
GO:0016043 cellular component organization 42.37% (25/59) 2.29 0.0 0.0
GO:0044237 cellular metabolic process 67.8% (40/59) 1.42 0.0 0.0
GO:0034470 ncRNA processing 18.64% (11/59) 4.27 0.0 0.0
GO:0009668 plastid membrane organization 16.95% (10/59) 4.57 0.0 0.0
GO:0010027 thylakoid membrane organization 16.95% (10/59) 4.57 0.0 0.0
GO:0006091 generation of precursor metabolites and energy 23.73% (14/59) 3.45 0.0 0.0
GO:0061024 membrane organization 16.95% (10/59) 4.48 0.0 0.0
GO:0071840 cellular component organization or biogenesis 42.37% (25/59) 2.16 0.0 0.0
GO:0034660 ncRNA metabolic process 18.64% (11/59) 3.91 0.0 0.0
GO:0071704 organic substance metabolic process 66.1% (39/59) 1.33 0.0 0.0
GO:0009532 plastid stroma 22.03% (13/59) 3.37 0.0 0.0
GO:0009570 chloroplast stroma 22.03% (13/59) 3.37 0.0 0.0
GO:0035304 regulation of protein dephosphorylation 13.56% (8/59) 4.75 0.0 0.0
GO:0035303 regulation of dephosphorylation 13.56% (8/59) 4.74 0.0 0.0
GO:0031977 thylakoid lumen 11.86% (7/59) 5.22 0.0 0.0
GO:1901135 carbohydrate derivative metabolic process 27.12% (16/59) 2.77 0.0 0.0
GO:0006996 organelle organization 28.81% (17/59) 2.64 0.0 0.0
GO:0000023 maltose metabolic process 13.56% (8/59) 4.62 0.0 0.0
GO:0046149 pigment catabolic process 10.17% (6/59) 5.68 0.0 0.0
GO:0015996 chlorophyll catabolic process 10.17% (6/59) 5.68 0.0 0.0
GO:0033015 tetrapyrrole catabolic process 10.17% (6/59) 5.68 0.0 0.0
GO:0006787 porphyrin-containing compound catabolic process 10.17% (6/59) 5.68 0.0 0.0
GO:0019252 starch biosynthetic process 13.56% (8/59) 4.33 0.0 0.0
GO:0005984 disaccharide metabolic process 13.56% (8/59) 4.28 0.0 0.0
GO:0019220 regulation of phosphate metabolic process 13.56% (8/59) 4.26 0.0 0.0
GO:0051174 regulation of phosphorus metabolic process 13.56% (8/59) 4.26 0.0 0.0
GO:0031399 regulation of protein modification process 13.56% (8/59) 4.22 0.0 0.0
GO:0019637 organophosphate metabolic process 25.42% (15/59) 2.62 0.0 0.0
GO:0009311 oligosaccharide metabolic process 13.56% (8/59) 4.16 0.0 0.0
GO:0006807 nitrogen compound metabolic process 50.85% (30/59) 1.46 0.0 0.0
GO:0046483 heterocycle metabolic process 37.29% (22/59) 1.88 0.0 0.0
GO:0005982 starch metabolic process 13.56% (8/59) 4.05 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 38.98% (23/59) 1.8 0.0 0.0
GO:0006796 phosphate-containing compound metabolic process 28.81% (17/59) 2.27 0.0 0.0
GO:0006793 phosphorus metabolic process 28.81% (17/59) 2.25 0.0 0.0
GO:0009617 response to bacterium 16.95% (10/59) 3.28 0.0 1e-06
GO:0034641 cellular nitrogen compound metabolic process 37.29% (22/59) 1.8 0.0 1e-06
GO:0051667 establishment of plastid localization 10.17% (6/59) 4.77 0.0 1e-06
GO:0009902 chloroplast relocation 10.17% (6/59) 4.77 0.0 1e-06
GO:1901360 organic cyclic compound metabolic process 38.98% (23/59) 1.72 0.0 1e-06
GO:0019750 chloroplast localization 10.17% (6/59) 4.76 0.0 1e-06
GO:0051644 plastid localization 10.17% (6/59) 4.76 0.0 1e-06
GO:0051656 establishment of organelle localization 10.17% (6/59) 4.73 0.0 1e-06
GO:0032268 regulation of cellular protein metabolic process 13.56% (8/59) 3.79 0.0 1e-06
GO:0015995 chlorophyll biosynthetic process 10.17% (6/59) 4.68 0.0 1e-06
GO:0051246 regulation of protein metabolic process 13.56% (8/59) 3.75 0.0 1e-06
GO:0016070 RNA metabolic process 25.42% (15/59) 2.34 0.0 1e-06
GO:0009250 glucan biosynthetic process 13.56% (8/59) 3.73 0.0 1e-06
GO:1901565 organonitrogen compound catabolic process 16.95% (10/59) 3.15 0.0 1e-06
GO:0043085 positive regulation of catalytic activity 10.17% (6/59) 4.61 0.0 1e-06
GO:0044093 positive regulation of molecular function 10.17% (6/59) 4.59 0.0 2e-06
GO:0009058 biosynthetic process 42.37% (25/59) 1.54 0.0 2e-06
GO:0044249 cellular biosynthetic process 38.98% (23/59) 1.62 0.0 2e-06
GO:0010304 PSII associated light-harvesting complex II catabolic process 6.78% (4/59) 6.07 0.0 3e-06
GO:0009543 chloroplast thylakoid lumen 8.47% (5/59) 5.04 0.0 3e-06
GO:0031978 plastid thylakoid lumen 8.47% (5/59) 5.04 0.0 3e-06
GO:0044257 cellular protein catabolic process 6.78% (4/59) 6.01 0.0 3e-06
GO:0006779 porphyrin-containing compound biosynthetic process 10.17% (6/59) 4.38 0.0 3e-06
GO:0033014 tetrapyrrole biosynthetic process 10.17% (6/59) 4.34 1e-06 4e-06
GO:0008150 biological_process 98.31% (58/59) 0.4 1e-06 5e-06
GO:0006396 RNA processing 18.64% (11/59) 2.72 1e-06 5e-06
GO:1901564 organonitrogen compound metabolic process 40.68% (24/59) 1.5 1e-06 5e-06
GO:0042742 defense response to bacterium 13.56% (8/59) 3.36 1e-06 8e-06
GO:0044042 glucan metabolic process 13.56% (8/59) 3.33 1e-06 9e-06
GO:0006073 cellular glucan metabolic process 13.56% (8/59) 3.33 1e-06 9e-06
GO:0019758 glycosinolate biosynthetic process 10.17% (6/59) 4.06 2e-06 1.1e-05
GO:0016144 S-glycoside biosynthetic process 10.17% (6/59) 4.06 2e-06 1.1e-05
GO:0019761 glucosinolate biosynthetic process 10.17% (6/59) 4.06 2e-06 1.1e-05
GO:1901659 glycosyl compound biosynthetic process 10.17% (6/59) 4.01 2e-06 1.3e-05
GO:1901576 organic substance biosynthetic process 38.98% (23/59) 1.47 2e-06 1.3e-05
GO:0046700 heterocycle catabolic process 11.86% (7/59) 3.57 2e-06 1.3e-05
GO:0043227 membrane-bounded organelle 88.14% (52/59) 0.55 2e-06 1.3e-05
GO:0043170 macromolecule metabolic process 42.37% (25/59) 1.37 2e-06 1.3e-05
GO:0051640 organelle localization 10.17% (6/59) 4.0 2e-06 1.3e-05
GO:0044270 cellular nitrogen compound catabolic process 11.86% (7/59) 3.56 2e-06 1.3e-05
GO:0019439 aromatic compound catabolic process 11.86% (7/59) 3.57 2e-06 1.3e-05
GO:0043231 intracellular membrane-bounded organelle 88.14% (52/59) 0.55 2e-06 1.3e-05
GO:1901361 organic cyclic compound catabolic process 11.86% (7/59) 3.54 2e-06 1.4e-05
GO:0016117 carotenoid biosynthetic process 8.47% (5/59) 4.54 3e-06 1.5e-05
GO:0016109 tetraterpenoid biosynthetic process 8.47% (5/59) 4.54 3e-06 1.5e-05
GO:0008299 isoprenoid biosynthetic process 11.86% (7/59) 3.48 3e-06 1.9e-05
GO:0016108 tetraterpenoid metabolic process 8.47% (5/59) 4.47 3e-06 1.9e-05
GO:0016116 carotenoid metabolic process 8.47% (5/59) 4.47 3e-06 1.9e-05
GO:0043229 intracellular organelle 88.14% (52/59) 0.54 3e-06 1.9e-05
GO:0043226 organelle 88.14% (52/59) 0.54 3e-06 1.9e-05
GO:0050790 regulation of catalytic activity 10.17% (6/59) 3.82 4e-06 2.4e-05
GO:0009735 response to cytokinin 10.17% (6/59) 3.81 4e-06 2.5e-05
GO:0019760 glucosinolate metabolic process 10.17% (6/59) 3.8 5e-06 2.6e-05
GO:0016143 S-glycoside metabolic process 10.17% (6/59) 3.8 5e-06 2.6e-05
GO:0019757 glycosinolate metabolic process 10.17% (6/59) 3.8 5e-06 2.6e-05
GO:0090304 nucleic acid metabolic process 25.42% (15/59) 1.93 5e-06 2.9e-05
GO:0006720 isoprenoid metabolic process 11.86% (7/59) 3.36 5e-06 2.9e-05
GO:0033692 cellular polysaccharide biosynthetic process 13.56% (8/59) 2.98 7e-06 4e-05
GO:0044272 sulfur compound biosynthetic process 13.56% (8/59) 2.98 7e-06 4e-05
GO:1901657 glycosyl compound metabolic process 10.17% (6/59) 3.59 1.1e-05 5.7e-05
GO:0034637 cellular carbohydrate biosynthetic process 13.56% (8/59) 2.88 1.2e-05 6.5e-05
GO:0046148 pigment biosynthetic process 10.17% (6/59) 3.54 1.3e-05 6.7e-05
GO:0051707 response to other organism 20.34% (12/59) 2.14 1.3e-05 6.9e-05
GO:0044419 biological process involved in interspecies interaction between organisms 20.34% (12/59) 2.13 1.4e-05 7.3e-05
GO:0065009 regulation of molecular function 10.17% (6/59) 3.52 1.4e-05 7.3e-05
GO:0016020 membrane 40.68% (24/59) 1.26 1.5e-05 7.4e-05
GO:0042793 plastid transcription 6.78% (4/59) 4.72 1.6e-05 8.2e-05
GO:0019684 photosynthesis, light reaction 8.47% (5/59) 3.99 1.6e-05 8.3e-05
GO:0051649 establishment of localization in cell 18.64% (11/59) 2.21 2e-05 0.000103
GO:0098542 defense response to other organism 16.95% (10/59) 2.33 2.5e-05 0.000123
GO:0000271 polysaccharide biosynthetic process 13.56% (8/59) 2.74 2.5e-05 0.000124
GO:0043207 response to external biotic stimulus 20.34% (12/59) 2.04 2.5e-05 0.000125
GO:0044264 cellular polysaccharide metabolic process 13.56% (8/59) 2.73 2.6e-05 0.000126
GO:0009607 response to biotic stimulus 20.34% (12/59) 2.04 2.6e-05 0.000126
GO:1901566 organonitrogen compound biosynthetic process 20.34% (12/59) 1.99 3.6e-05 0.000173
GO:0051641 cellular localization 18.64% (11/59) 2.08 4.7e-05 0.000224
GO:0044550 secondary metabolite biosynthetic process 10.17% (6/59) 3.18 5.2e-05 0.000245
GO:0010218 response to far red light 6.78% (4/59) 4.24 6e-05 0.000285
GO:0044262 cellular carbohydrate metabolic process 13.56% (8/59) 2.54 6.5e-05 0.000305
GO:0034645 cellular macromolecule biosynthetic process 18.64% (11/59) 2.01 7.2e-05 0.000336
GO:0010114 response to red light 6.78% (4/59) 4.17 7.3e-05 0.000338
GO:0005976 polysaccharide metabolic process 13.56% (8/59) 2.51 7.4e-05 0.00034
GO:0044238 primary metabolic process 45.76% (27/59) 1.0 9.2e-05 0.000419
GO:0016120 carotene biosynthetic process 3.39% (2/59) 7.07 9.3e-05 0.000423
GO:0016556 mRNA modification 6.78% (4/59) 4.03 0.000108 0.000487
GO:0006139 nucleobase-containing compound metabolic process 25.42% (15/59) 1.55 0.000115 0.000512
GO:0006790 sulfur compound metabolic process 13.56% (8/59) 2.41 0.000121 0.000536
GO:0019682 glyceraldehyde-3-phosphate metabolic process 8.47% (5/59) 3.36 0.000127 0.000557
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 8.47% (5/59) 3.36 0.000127 0.000557
GO:0009240 isopentenyl diphosphate biosynthetic process 8.47% (5/59) 3.34 0.000138 0.000597
GO:0046490 isopentenyl diphosphate metabolic process 8.47% (5/59) 3.34 0.000138 0.000597
GO:0009637 response to blue light 6.78% (4/59) 3.87 0.000164 0.000705
GO:0009773 photosynthetic electron transport in photosystem I 5.08% (3/59) 4.81 0.000168 0.000721
GO:0010206 photosystem II repair 3.39% (2/59) 6.55 0.000199 0.000842
GO:0030091 protein repair 3.39% (2/59) 6.55 0.000199 0.000842
GO:0044260 cellular macromolecule metabolic process 30.51% (18/59) 1.29 0.000202 0.00085
GO:0016114 terpenoid biosynthetic process 8.47% (5/59) 3.18 0.000226 0.000937
GO:0009059 macromolecule biosynthetic process 18.64% (11/59) 1.82 0.000225 0.00094
GO:0019438 aromatic compound biosynthetic process 16.95% (10/59) 1.92 0.000268 0.001108
GO:0006952 defense response 16.95% (10/59) 1.9 0.000292 0.00119
GO:0016119 carotene metabolic process 3.39% (2/59) 6.29 0.000291 0.001196
GO:0019748 secondary metabolic process 11.86% (7/59) 2.41 0.000329 0.001334
GO:0006721 terpenoid metabolic process 8.47% (5/59) 3.05 0.000345 0.001385
GO:0046246 terpene biosynthetic process 3.39% (2/59) 6.17 0.000344 0.001387
GO:0016051 carbohydrate biosynthetic process 13.56% (8/59) 2.18 0.000362 0.001443
GO:0009767 photosynthetic electron transport chain 5.08% (3/59) 4.44 0.000367 0.001454
GO:0010287 plastoglobule 5.08% (3/59) 4.37 0.000419 0.001652
GO:0044248 cellular catabolic process 16.95% (10/59) 1.83 0.000433 0.001696
GO:0033559 unsaturated fatty acid metabolic process 5.08% (3/59) 4.33 0.000456 0.001759
GO:0006636 unsaturated fatty acid biosynthetic process 5.08% (3/59) 4.33 0.000456 0.001759
GO:0043436 oxoacid metabolic process 20.34% (12/59) 1.6 0.000456 0.001778
GO:0097659 nucleic acid-templated transcription 6.78% (4/59) 3.41 0.000549 0.002095
GO:0006351 transcription, DNA-templated 6.78% (4/59) 3.41 0.000549 0.002095
GO:0006082 organic acid metabolic process 20.34% (12/59) 1.57 0.000576 0.002188
GO:1901137 carbohydrate derivative biosynthetic process 10.17% (6/59) 2.53 0.000592 0.002233
GO:0010155 regulation of proton transport 5.08% (3/59) 4.19 0.000603 0.002252
GO:0031969 chloroplast membrane 5.08% (3/59) 4.19 0.000603 0.002252
GO:1904062 regulation of cation transmembrane transport 5.08% (3/59) 4.15 0.00065 0.002414
GO:0006081 cellular aldehyde metabolic process 8.47% (5/59) 2.85 0.000656 0.002425
GO:0010310 regulation of hydrogen peroxide metabolic process 6.78% (4/59) 3.33 0.000676 0.002483
GO:0009965 leaf morphogenesis 6.78% (4/59) 3.32 0.000703 0.002571
GO:0015979 photosynthesis 6.78% (4/59) 3.31 0.000717 0.002608
GO:0042214 terpene metabolic process 3.39% (2/59) 5.62 0.000747 0.002705
GO:0009605 response to external stimulus 20.34% (12/59) 1.51 0.000816 0.002924
GO:1901575 organic substance catabolic process 16.95% (10/59) 1.71 0.000815 0.002936
GO:2000377 regulation of reactive oxygen species metabolic process 6.78% (4/59) 3.21 0.000919 0.003257
GO:0000413 protein peptidyl-prolyl isomerization 3.39% (2/59) 5.48 0.000915 0.003262
GO:0090407 organophosphate biosynthetic process 11.86% (7/59) 2.16 0.000943 0.003326
GO:0031323 regulation of cellular metabolic process 22.03% (13/59) 1.4 0.000975 0.003423
GO:0022900 electron transport chain 5.08% (3/59) 3.95 0.000981 0.003425
GO:0000165 MAPK cascade 6.78% (4/59) 3.19 0.000988 0.003433
GO:0044281 small molecule metabolic process 23.73% (14/59) 1.32 0.001021 0.003531
GO:1901362 organic cyclic compound biosynthetic process 16.95% (10/59) 1.66 0.001088 0.003743
GO:0005527 macrolide binding 3.39% (2/59) 5.35 0.0011 0.003748
GO:0005528 FK506 binding 3.39% (2/59) 5.35 0.0011 0.003748
GO:0018130 heterocycle biosynthetic process 13.56% (8/59) 1.93 0.001123 0.00381
GO:0072330 monocarboxylic acid biosynthetic process 10.17% (6/59) 2.32 0.001252 0.004226
GO:0008654 phospholipid biosynthetic process 8.47% (5/59) 2.6 0.001409 0.004732
GO:0019222 regulation of metabolic process 23.73% (14/59) 1.27 0.001488 0.004973
GO:0009707 chloroplast outer membrane 3.39% (2/59) 5.07 0.001632 0.00543
GO:0034765 regulation of ion transmembrane transport 5.08% (3/59) 3.66 0.001737 0.005753
GO:0008047 enzyme activator activity 3.39% (2/59) 5.01 0.001751 0.00577
GO:0006644 phospholipid metabolic process 8.47% (5/59) 2.52 0.001776 0.005826
GO:0008610 lipid biosynthetic process 13.56% (8/59) 1.81 0.001885 0.006125
GO:0080090 regulation of primary metabolic process 20.34% (12/59) 1.37 0.001876 0.006127
GO:0006090 pyruvate metabolic process 8.47% (5/59) 2.5 0.001913 0.006187
GO:0030163 protein catabolic process 6.78% (4/59) 2.92 0.001923 0.006193
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway 6.78% (4/59) 2.9 0.002039 0.006535
GO:0031361 integral component of thylakoid membrane 1.69% (1/59) 8.87 0.002133 0.006598
GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity 1.69% (1/59) 8.87 0.002133 0.006598
GO:0031360 intrinsic component of thylakoid membrane 1.69% (1/59) 8.87 0.002133 0.006598
GO:0009661 chromoplast organization 1.69% (1/59) 8.87 0.002133 0.006598
GO:0030504 inorganic diphosphate transmembrane transporter activity 1.69% (1/59) 8.87 0.002133 0.006598
GO:0035970 peptidyl-threonine dephosphorylation 1.69% (1/59) 8.87 0.002133 0.006598
GO:0016719 carotene 7,8-desaturase activity 1.69% (1/59) 8.87 0.002133 0.006598
GO:0034762 regulation of transmembrane transport 5.08% (3/59) 3.57 0.002069 0.0066
GO:0009527 plastid outer membrane 3.39% (2/59) 4.83 0.002264 0.006971
GO:0018208 peptidyl-proline modification 3.39% (2/59) 4.7 0.002691 0.008248
GO:0045893 positive regulation of transcription, DNA-templated 8.47% (5/59) 2.38 0.002741 0.008257
GO:0051254 positive regulation of RNA metabolic process 8.47% (5/59) 2.38 0.002741 0.008257
GO:1903508 positive regulation of nucleic acid-templated transcription 8.47% (5/59) 2.38 0.002741 0.008257
GO:1902680 positive regulation of RNA biosynthetic process 8.47% (5/59) 2.38 0.002741 0.008257
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 8.47% (5/59) 2.36 0.002873 0.008547
GO:0006979 response to oxidative stress 8.47% (5/59) 2.36 0.002873 0.008547
GO:0009056 catabolic process 16.95% (10/59) 1.47 0.002898 0.008584
GO:0031348 negative regulation of defense response 6.78% (4/59) 2.76 0.002872 0.008616
GO:0006109 regulation of carbohydrate metabolic process 3.39% (2/59) 4.62 0.002994 0.008794
GO:0044255 cellular lipid metabolic process 13.56% (8/59) 1.7 0.002992 0.008825
GO:0009867 jasmonic acid mediated signaling pathway 6.78% (4/59) 2.73 0.003102 0.009073
GO:0051171 regulation of nitrogen compound metabolic process 18.64% (11/59) 1.34 0.003483 0.010105
GO:0010557 positive regulation of macromolecule biosynthetic process 8.47% (5/59) 2.3 0.003482 0.010144
GO:0043269 regulation of ion transport 5.08% (3/59) 3.3 0.003561 0.010289
GO:0031328 positive regulation of cellular biosynthetic process 8.47% (5/59) 2.28 0.003705 0.010658
GO:0051173 positive regulation of nitrogen compound metabolic process 8.47% (5/59) 2.27 0.003737 0.010708
GO:0006633 fatty acid biosynthetic process 5.08% (3/59) 3.27 0.003775 0.010773
GO:0065007 biological regulation 33.9% (20/59) 0.86 0.003867 0.01099
GO:0032774 RNA biosynthetic process 6.78% (4/59) 2.63 0.003959 0.011207
GO:0042743 hydrogen peroxide metabolic process 5.08% (3/59) 3.24 0.003996 0.011266
GO:0010604 positive regulation of macromolecule metabolic process 8.47% (5/59) 2.24 0.004144 0.011637
GO:0046320 regulation of fatty acid oxidation 1.69% (1/59) 7.87 0.004262 0.011643
GO:0080079 cellobiose glucosidase activity 1.69% (1/59) 7.87 0.004262 0.011643
GO:0031998 regulation of fatty acid beta-oxidation 1.69% (1/59) 7.87 0.004262 0.011643
GO:0009977 proton motive force dependent protein transmembrane transporter activity 1.69% (1/59) 7.87 0.004262 0.011643
GO:0004328 formamidase activity 1.69% (1/59) 7.87 0.004262 0.011643
GO:0080093 regulation of photorespiration 1.69% (1/59) 7.87 0.004262 0.011643
GO:1905392 plant organ morphogenesis 6.78% (4/59) 2.61 0.004196 0.011736
GO:0031325 positive regulation of cellular metabolic process 8.47% (5/59) 2.22 0.004359 0.011861
GO:0044271 cellular nitrogen compound biosynthetic process 13.56% (8/59) 1.61 0.004403 0.011935
GO:0009853 photorespiration 5.08% (3/59) 3.14 0.00479 0.012932
GO:0031347 regulation of defense response 8.47% (5/59) 2.17 0.005011 0.013479
GO:0031968 organelle outer membrane 3.39% (2/59) 4.23 0.005132 0.013596
GO:0019867 outer membrane 3.39% (2/59) 4.23 0.005132 0.013596
GO:0033218 amide binding 3.39% (2/59) 4.23 0.005132 0.013596
GO:0009451 RNA modification 6.78% (4/59) 2.53 0.005129 0.013742
GO:0048046 apoplast 6.78% (4/59) 2.52 0.005297 0.013978
GO:0044283 small molecule biosynthetic process 13.56% (8/59) 1.56 0.005404 0.014207
GO:0005975 carbohydrate metabolic process 13.56% (8/59) 1.56 0.005454 0.014287
GO:0072593 reactive oxygen species metabolic process 5.08% (3/59) 3.06 0.005672 0.014802
GO:0050896 response to stimulus 35.59% (21/59) 0.78 0.006079 0.015806
GO:0080134 regulation of response to stress 8.47% (5/59) 2.1 0.006186 0.015849
GO:0005777 peroxisome 5.08% (3/59) 3.01 0.006147 0.015866
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 3.39% (2/59) 4.09 0.006179 0.01589
GO:0032787 monocarboxylic acid metabolic process 13.56% (8/59) 1.53 0.006144 0.015914
GO:0051049 regulation of transport 5.08% (3/59) 3.01 0.006245 0.015942
GO:0050789 regulation of biological process 30.51% (18/59) 0.87 0.006394 0.016088
GO:0043235 receptor complex 1.69% (1/59) 7.29 0.006387 0.016128
GO:0080183 response to photooxidative stress 1.69% (1/59) 7.29 0.006387 0.016128
GO:0033281 TAT protein transport complex 1.69% (1/59) 7.29 0.006387 0.016128
GO:0016071 mRNA metabolic process 6.78% (4/59) 2.43 0.006446 0.016162
GO:0009863 salicylic acid mediated signaling pathway 6.78% (4/59) 2.43 0.006576 0.016429
GO:0043094 cellular metabolic compound salvage 5.08% (3/59) 2.96 0.006852 0.017057
GO:0016859 cis-trans isomerase activity 3.39% (2/59) 3.99 0.007081 0.017503
GO:0043086 negative regulation of catalytic activity 3.39% (2/59) 3.99 0.007081 0.017503
GO:0050794 regulation of cellular process 27.12% (16/59) 0.93 0.007124 0.017548
GO:0042579 microbody 5.08% (3/59) 2.93 0.007168 0.017594
GO:0048585 negative regulation of response to stimulus 6.78% (4/59) 2.36 0.007751 0.018959
GO:0006612 protein targeting to membrane 6.78% (4/59) 2.34 0.008046 0.019545
GO:0006655 phosphatidylglycerol biosynthetic process 3.39% (2/59) 3.9 0.008039 0.019594
GO:0010363 regulation of plant-type hypersensitive response 6.78% (4/59) 2.34 0.008121 0.019659
GO:0046471 phosphatidylglycerol metabolic process 3.39% (2/59) 3.87 0.008287 0.019719
GO:0090150 establishment of protein localization to membrane 6.78% (4/59) 2.33 0.008273 0.019753
GO:0043903 regulation of biological process involved in symbiotic interaction 6.78% (4/59) 2.33 0.008273 0.019753
GO:0072657 protein localization to membrane 6.78% (4/59) 2.33 0.008273 0.019753
GO:0009891 positive regulation of biosynthetic process 8.47% (5/59) 2.0 0.008208 0.019801
GO:0010264 myo-inositol hexakisphosphate biosynthetic process 3.39% (2/59) 3.85 0.008538 0.019979
GO:0032958 inositol phosphate biosynthetic process 3.39% (2/59) 3.85 0.008538 0.019979
GO:0033517 myo-inositol hexakisphosphate metabolic process 3.39% (2/59) 3.85 0.008538 0.019979
GO:0051668 localization within membrane 6.78% (4/59) 2.32 0.008426 0.019983
GO:0034613 cellular protein localization 10.17% (6/59) 1.76 0.008521 0.020141
GO:0080135 regulation of cellular response to stress 6.78% (4/59) 2.29 0.009138 0.021311
GO:0046173 polyol biosynthetic process 3.39% (2/59) 3.79 0.009313 0.021647
GO:0009639 response to red or far red light 6.78% (4/59) 2.28 0.009384 0.02174
GO:0045088 regulation of innate immune response 6.78% (4/59) 2.27 0.009467 0.02186
GO:0044092 negative regulation of molecular function 3.39% (2/59) 3.76 0.009578 0.021901
GO:0002682 regulation of immune system process 6.78% (4/59) 2.27 0.00955 0.021909
GO:0050776 regulation of immune response 6.78% (4/59) 2.27 0.00955 0.021909
GO:0009893 positive regulation of metabolic process 8.47% (5/59) 1.93 0.009983 0.022753
GO:0043067 regulation of programmed cell death 6.78% (4/59) 2.24 0.010234 0.023251
GO:0070727 cellular macromolecule localization 10.17% (6/59) 1.69 0.010365 0.023471
GO:0032879 regulation of localization 5.08% (3/59) 2.72 0.010671 0.024087
GO:0010941 regulation of cell death 6.78% (4/59) 2.21 0.01095 0.024637
GO:0002831 regulation of response to biotic stimulus 6.78% (4/59) 2.2 0.011134 0.024971
GO:0032101 regulation of response to external stimulus 6.78% (4/59) 2.19 0.011507 0.025726
GO:0050665 hydrogen peroxide biosynthetic process 3.39% (2/59) 3.61 0.011816 0.026003
GO:1903409 reactive oxygen species biosynthetic process 3.39% (2/59) 3.61 0.011816 0.026003
GO:0060255 regulation of macromolecule metabolic process 18.64% (11/59) 1.1 0.011694 0.026061
GO:0009416 response to light stimulus 11.86% (7/59) 1.49 0.011804 0.02614
GO:0006629 lipid metabolic process 13.56% (8/59) 1.36 0.011778 0.026166
GO:0006886 intracellular protein transport 10.17% (6/59) 1.65 0.011984 0.02629
GO:0050994 regulation of lipid catabolic process 1.69% (1/59) 6.29 0.012734 0.027761
GO:0016849 phosphorus-oxygen lyase activity 1.69% (1/59) 6.29 0.012734 0.027761
GO:0046394 carboxylic acid biosynthetic process 10.17% (6/59) 1.63 0.012794 0.027806
GO:0009072 aromatic amino acid family metabolic process 5.08% (3/59) 2.61 0.013112 0.028409
GO:0045184 establishment of protein localization 10.17% (6/59) 1.58 0.014739 0.031738
GO:0015031 protein transport 10.17% (6/59) 1.58 0.014739 0.031738
GO:0016050 vesicle organization 1.69% (1/59) 6.07 0.01484 0.031859
GO:0043647 inositol phosphate metabolic process 3.39% (2/59) 3.41 0.015229 0.032594
GO:0008104 protein localization 10.17% (6/59) 1.57 0.015528 0.033132
GO:0043900 obsolete regulation of multi-organism process 3.39% (2/59) 3.38 0.01589 0.033803
GO:0009314 response to radiation 11.86% (7/59) 1.4 0.016154 0.034158
GO:0048522 positive regulation of cellular process 8.47% (5/59) 1.76 0.016122 0.034193
GO:0009533 chloroplast stromal thylakoid 1.69% (1/59) 5.87 0.016943 0.03561
GO:0010190 cytochrome b6f complex assembly 1.69% (1/59) 5.87 0.016943 0.03561
GO:0009069 serine family amino acid metabolic process 5.08% (3/59) 2.46 0.017237 0.036013
GO:0048583 regulation of response to stimulus 8.47% (5/59) 1.73 0.017235 0.036117
GO:0044267 cellular protein metabolic process 15.25% (9/59) 1.15 0.018481 0.038384
GO:0006950 response to stress 23.73% (14/59) 0.86 0.018427 0.038385
GO:0016053 organic acid biosynthetic process 10.17% (6/59) 1.49 0.019318 0.040003
GO:0035556 intracellular signal transduction 6.78% (4/59) 1.96 0.019524 0.040312
GO:0019538 protein metabolic process 18.64% (11/59) 0.99 0.020431 0.042059
GO:0033036 macromolecule localization 10.17% (6/59) 1.47 0.020622 0.042329
GO:0009595 detection of biotic stimulus 3.39% (2/59) 3.17 0.020851 0.042675
GO:0019217 regulation of fatty acid metabolic process 1.69% (1/59) 5.55 0.021134 0.043128
GO:0006605 protein targeting 8.47% (5/59) 1.65 0.021202 0.043142
GO:0046907 intracellular transport 10.17% (6/59) 1.46 0.021524 0.043671
GO:1901605 alpha-amino acid metabolic process 6.78% (4/59) 1.88 0.023296 0.047129
GO:0019751 polyol metabolic process 3.39% (2/59) 3.07 0.023938 0.048289
GO:0044265 cellular macromolecule catabolic process 6.78% (4/59) 1.86 0.024493 0.049266
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_7 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_17 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_29 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_188 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_227 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_243 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_261 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_40 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_65 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_90 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_103 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_122 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_136 0.035 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_149 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_166 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_7 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_11 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_14 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_42 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_61 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_74 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_84 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_112 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_132 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_138 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_8 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_51 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_54 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_69 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_103 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_120 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_170 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_171 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_177 0.054 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_231 0.056 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_247 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_38 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_66 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_118 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_137 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_138 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_168 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (59) (download table)

InterPro Domains

GO Terms

Family Terms