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AT4G37590


Description : Phototropic-responsive NPH3 family protein


Gene families : OG_01_0000052 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G37590
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT3G08660 No alias Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009416 response to light stimulus ISS Interproscan
BP GO:0009908 flower development IGI Interproscan
BP GO:0009958 positive gravitropism IGI Interproscan
BP GO:0010075 regulation of meristem growth RCA Interproscan
CC GO:0071944 cell periphery IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000247 C-8 sterol isomerase activity IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0004407 histone deacetylase activity IEP HCCA
MF GO:0004422 hypoxanthine phosphoribosyltransferase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005355 glucose transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
CC GO:0005853 eukaryotic translation elongation factor 1 complex IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
BP GO:0006166 purine ribonucleoside salvage IEP HCCA
BP GO:0006168 adenine salvage IEP HCCA
BP GO:0006177 GMP biosynthetic process IEP HCCA
BP GO:0006178 guanine salvage IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
MF GO:0008381 mechanosensitive ion channel activity IEP HCCA
MF GO:0008395 steroid hydroxylase activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009113 purine nucleobase biosynthetic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009163 nucleoside biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009405 obsolete pathogenesis IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009861 jasmonic acid and ethylene-dependent systemic resistance IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
CC GO:0009925 basal plasma membrane IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
BP GO:0010268 brassinosteroid homeostasis IEP HCCA
BP GO:0010338 leaf formation IEP HCCA
BP GO:0010358 leaf shaping IEP HCCA
BP GO:0010444 guard mother cell differentiation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0010962 regulation of glucan biosynthetic process IEP HCCA
MF GO:0015120 phosphoglycerate transmembrane transporter activity IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015149 hexose transmembrane transporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015712 hexose phosphate transport IEP HCCA
BP GO:0015713 phosphoglycerate transmembrane transport IEP HCCA
BP GO:0015717 triose phosphate transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0030856 regulation of epithelial cell differentiation IEP HCCA
BP GO:0032261 purine nucleotide salvage IEP HCCA
BP GO:0032263 GMP salvage IEP HCCA
BP GO:0032264 IMP salvage IEP HCCA
BP GO:0032881 regulation of polysaccharide metabolic process IEP HCCA
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP HCCA
BP GO:0032950 regulation of beta-glucan metabolic process IEP HCCA
BP GO:0032951 regulation of beta-glucan biosynthetic process IEP HCCA
BP GO:0032957 inositol trisphosphate metabolic process IEP HCCA
MF GO:0033558 protein deacetylase activity IEP HCCA
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP HCCA
BP GO:0035436 triose phosphate transmembrane transport IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0042278 purine nucleoside metabolic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042451 purine nucleoside biosynthetic process IEP HCCA
BP GO:0042455 ribonucleoside biosynthetic process IEP HCCA
BP GO:0042873 aldonate transmembrane transport IEP HCCA
MF GO:0042879 aldonate transmembrane transporter activity IEP HCCA
BP GO:0043096 purine nucleobase salvage IEP HCCA
BP GO:0043101 purine-containing compound salvage IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043173 nucleotide salvage IEP HCCA
BP GO:0043174 nucleoside salvage IEP HCCA
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP HCCA
MF GO:0043295 glutathione binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0045177 apical part of cell IEP HCCA
BP GO:0045604 regulation of epidermal cell differentiation IEP HCCA
BP GO:0045682 regulation of epidermis development IEP HCCA
BP GO:0046037 GMP metabolic process IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046083 adenine metabolic process IEP HCCA
BP GO:0046084 adenine biosynthetic process IEP HCCA
BP GO:0046098 guanine metabolic process IEP HCCA
BP GO:0046099 guanine biosynthetic process IEP HCCA
BP GO:0046100 hypoxanthine metabolic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0046128 purine ribonucleoside metabolic process IEP HCCA
BP GO:0046129 purine ribonucleoside biosynthetic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048826 cotyledon morphogenesis IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0050982 detection of mechanical stimulus IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
BP GO:0060147 regulation of posttranscriptional gene silencing IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0060964 regulation of gene silencing by miRNA IEP HCCA
BP GO:0060966 regulation of gene silencing by RNA IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070417 cellular response to cold IEP HCCA
BP GO:0070726 cell wall assembly IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0071668 plant-type cell wall assembly IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0071917 triose-phosphate transmembrane transporter activity IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
BP GO:0098656 anion transmembrane transport IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0106130 purine phosphoribosyltransferase activity IEP HCCA
BP GO:0106380 purine ribonucleotide salvage IEP HCCA
MF GO:1900750 oligopeptide binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2001006 regulation of cellulose biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 214 441
IPR000210 BTB/POZ_dom 25 128
PLAZA 3.0 Dicots AT4G37590