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  5. AT5G11420

AT5G11420


Description : Protein of unknown function, DUF642


Gene families : OG_01_0001534 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001534_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G11420
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AT1G80240 No alias Protein of unknown function, DUF642 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G08030 No alias Protein of unknown function, DUF642 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005618 cell wall IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009505 plant-type cell wall IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005275 amine transmembrane transporter activity IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006566 threonine metabolic process IEP HCCA
BP GO:0006567 threonine catabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006949 syncytium formation IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009531 secondary cell wall IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009638 phototropism IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009645 response to low light intensity stimulus IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
CC GO:0009986 cell surface IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010114 response to red light IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP HCCA
BP GO:0010423 negative regulation of brassinosteroid biosynthetic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0010894 negative regulation of steroid biosynthetic process IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016098 monoterpenoid metabolic process IEP HCCA
BP GO:0016099 monoterpenoid biosynthetic process IEP HCCA
CC GO:0016328 lateral plasma membrane IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019218 regulation of steroid metabolic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022622 root system development IEP HCCA
BP GO:0030308 negative regulation of cell growth IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
BP GO:0032350 regulation of hormone metabolic process IEP HCCA
BP GO:0032351 negative regulation of hormone metabolic process IEP HCCA
BP GO:0032353 negative regulation of hormone biosynthetic process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032875 regulation of DNA endoreduplication IEP HCCA
BP GO:0032876 negative regulation of DNA endoreduplication IEP HCCA
BP GO:0032877 positive regulation of DNA endoreduplication IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
MF GO:0034007 S-linalool synthase activity IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of ion transmembrane transport IEP HCCA
MF GO:0034768 (E)-beta-ocimene synthase activity IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0043269 regulation of ion transport IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0043692 monoterpene metabolic process IEP HCCA
BP GO:0043693 monoterpene biosynthetic process IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
CC GO:0045298 tubulin complex IEP HCCA
BP GO:0045740 positive regulation of DNA replication IEP HCCA
BP GO:0045833 negative regulation of lipid metabolic process IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0045939 negative regulation of steroid metabolic process IEP HCCA
BP GO:0046246 terpene biosynthetic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0046885 regulation of hormone biosynthetic process IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048766 root hair initiation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
MF GO:0050551 myrcene synthase activity IEP HCCA
BP GO:0050810 regulation of steroid biosynthetic process IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051055 negative regulation of lipid biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051513 regulation of monopolar cell growth IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080027 response to herbivore IEP HCCA
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP HCCA
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP HCCA
BP GO:0090032 negative regulation of steroid hormone biosynthetic process IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090068 positive regulation of cell cycle process IEP HCCA
BP GO:0090329 regulation of DNA-dependent DNA replication IEP HCCA
BP GO:0090393 sepal giant cell development IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1904062 regulation of cation transmembrane transport IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:2000012 regulation of auxin polar transport IEP HCCA
BP GO:2000038 regulation of stomatal complex development IEP HCCA
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP HCCA
BP GO:2000105 positive regulation of DNA-dependent DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR006946 DUF642 194 360
IPR006946 DUF642 26 182
PLAZA 3.0 Dicots AT5G11420