AT5G12150

Description : Rho GTPase activation protein (RhoGAP) with PH domain

Gene families : OG_01_0001302 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001302_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G12150
Cluster	HCCA: Cluster_214

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	RCA	Interproscan
BP	GO:0000226	microtubule cytoskeleton organization	None	Extended
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005543	phospholipid binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	None	Extended
BP	GO:0005984	disaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007020	microtubule nucleation	RCA	Interproscan
BP	GO:0007165	signal transduction	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008289	lipid binding	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0019252	starch biosynthetic process	RCA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035091	phosphatidylinositol binding	ISS	Interproscan
BP	GO:0043085	positive regulation of catalytic activity	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	HCCA
MF	GO:0004072	aspartate kinase activity	IEP	HCCA
MF	GO:0004133	glycogen debranching enzyme activity	IEP	HCCA
MF	GO:0004326	tetrahydrofolylpolyglutamate synthase activity	IEP	HCCA
MF	GO:0004412	homoserine dehydrogenase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004556	alpha-amylase activity	IEP	HCCA
MF	GO:0004565	beta-galactosidase activity	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006730	one-carbon metabolic process	IEP	HCCA
BP	GO:0006775	fat-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009527	plastid outer membrane	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
CC	GO:0009707	chloroplast outer membrane	IEP	HCCA
BP	GO:0010020	chloroplast fission	IEP	HCCA
BP	GO:0010021	amylopectin biosynthetic process	IEP	HCCA
BP	GO:0010109	regulation of photosynthesis	IEP	HCCA
CC	GO:0010368	chloroplast isoamylase complex	IEP	HCCA
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0015925	galactosidase activity	IEP	HCCA
MF	GO:0016160	amylase activity	IEP	HCCA
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
MF	GO:0019156	isoamylase activity	IEP	HCCA
MF	GO:0019202	amino acid kinase activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0031425	chloroplast RNA processing	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
CC	GO:0042170	plastid membrane	IEP	HCCA
BP	GO:0042181	ketone biosynthetic process	IEP	HCCA
BP	GO:0042362	fat-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042371	vitamin K biosynthetic process	IEP	HCCA
BP	GO:0042372	phylloquinone biosynthetic process	IEP	HCCA
BP	GO:0042373	vitamin K metabolic process	IEP	HCCA
BP	GO:0042374	phylloquinone metabolic process	IEP	HCCA
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0042550	photosystem I stabilization	IEP	HCCA
CC	GO:0043033	isoamylase complex	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0043572	plastid fission	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
BP	GO:0080092	regulation of pollen tube growth	IEP	HCCA
BP	GO:0090351	seedling development	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1901661	quinone metabolic process	IEP	HCCA
BP	GO:1901663	quinone biosynthetic process	IEP	HCCA
BP	GO:2000896	amylopectin metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001849	PH_domain	19	124
IPR000198	RhoGAP_dom	181	325
IPR025757	MIP1_Leuzipper	601	680

External Links

PLAZA 3.0 Dicots	AT5G12150

AT5G12150

Expression Profile

Co-expression Networks

Functional Annotation