AT5G15410

Description : Cyclic nucleotide-regulated ion channel family protein

Gene families : OG_01_0006130 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006130_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G15410
Cluster	HCCA: Cluster_249

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005217	intracellular ligand-gated ion channel activity	None	Extended
MF	GO:0005221	intracellular cyclic nucleotide activated cation channel activity	IMP	Interproscan
MF	GO:0005222	intracellular cAMP-activated cation channel activity	IDA	Interproscan
MF	GO:0005242	inward rectifier potassium channel activity	IGI	Interproscan
MF	GO:0005244	voltage-gated ion channel activity	None	Extended
MF	GO:0005249	voltage-gated potassium channel activity	None	Extended
MF	GO:0005261	cation channel activity	ISS	Interproscan
MF	GO:0005262	calcium channel activity	IMP	Interproscan
MF	GO:0005267	potassium channel activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	TAS	Interproscan
BP	GO:0006955	immune response	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007263	nitric oxide mediated signal transduction	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008219	cell death	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009626	plant-type hypersensitive response	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0012501	programmed cell death	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015079	potassium ion transmembrane transporter activity	None	Extended
MF	GO:0015085	calcium ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0019932	second-messenger-mediated signaling	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022843	voltage-gated cation channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
MF	GO:0030551	cyclic nucleotide binding	ISS	Interproscan
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034050	programmed cell death induced by symbiont	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
MF	GO:0043855	cyclic nucleotide-gated ion channel activity	None	Extended
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045087	innate immune response	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051702	biological process involved in interaction with symbiont	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
MF	GO:0099094	ligand-gated cation channel activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	HCCA
BP	GO:0000096	sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
BP	GO:0002682	regulation of immune system process	IEP	HCCA
BP	GO:0002831	regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0003984	acetolactate synthase activity	IEP	HCCA
MF	GO:0004737	pyruvate decarboxylase activity	IEP	HCCA
MF	GO:0005372	water transmembrane transporter activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006520	cellular amino acid metabolic process	IEP	HCCA
BP	GO:0006534	cysteine metabolic process	IEP	HCCA
BP	GO:0006544	glycine metabolic process	IEP	HCCA
BP	GO:0006546	glycine catabolic process	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006636	unsaturated fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006733	obsolete oxidoreduction coenzyme metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006873	cellular ion homeostasis	IEP	HCCA
BP	GO:0006874	cellular calcium ion homeostasis	IEP	HCCA
BP	GO:0006875	cellular metal ion homeostasis	IEP	HCCA
BP	GO:0007602	phototransduction	IEP	HCCA
BP	GO:0007623	circadian rhythm	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009071	serine family amino acid catabolic process	IEP	HCCA
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	HCCA
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	HCCA
BP	GO:0009106	lipoate metabolic process	IEP	HCCA
BP	GO:0009108	obsolete coenzyme biosynthetic process	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009581	detection of external stimulus	IEP	HCCA
BP	GO:0009582	detection of abiotic stimulus	IEP	HCCA
BP	GO:0009583	detection of light stimulus	IEP	HCCA
BP	GO:0009585	red, far-red light phototransduction	IEP	HCCA
BP	GO:0009617	response to bacterium	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009637	response to blue light	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
BP	GO:0009785	blue light signaling pathway	IEP	HCCA
MF	GO:0009881	photoreceptor activity	IEP	HCCA
MF	GO:0009882	blue light photoreceptor activity	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0009965	leaf morphogenesis	IEP	HCCA
BP	GO:0010017	red or far-red light signaling pathway	IEP	HCCA
BP	GO:0010118	stomatal movement	IEP	HCCA
BP	GO:0010155	regulation of proton transport	IEP	HCCA
BP	GO:0010264	myo-inositol hexakisphosphate biosynthetic process	IEP	HCCA
BP	GO:0010343	singlet oxygen-mediated programmed cell death	IEP	HCCA
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010600	regulation of auxin biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010617	circadian regulation of calcium ion oscillation	IEP	HCCA
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
MF	GO:0015250	water channel activity	IEP	HCCA
MF	GO:0015421	ABC-type oligopeptide transporter activity	IEP	HCCA
MF	GO:0015440	ABC-type peptide transporter activity	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016744	transketolase or transaldolase activity	IEP	HCCA
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019344	cysteine biosynthetic process	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0030003	cellular cation homeostasis	IEP	HCCA
BP	GO:0030154	cell differentiation	IEP	HCCA
BP	GO:0030522	intracellular receptor signaling pathway	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0032101	regulation of response to external stimulus	IEP	HCCA
BP	GO:0032350	regulation of hormone metabolic process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0032958	inositol phosphate biosynthetic process	IEP	HCCA
BP	GO:0033517	myo-inositol hexakisphosphate metabolic process	IEP	HCCA
BP	GO:0033559	unsaturated fatty acid metabolic process	IEP	HCCA
BP	GO:0034762	regulation of transmembrane transport	IEP	HCCA
BP	GO:0034765	regulation of ion transmembrane transport	IEP	HCCA
BP	GO:0035672	oligopeptide transmembrane transport	IEP	HCCA
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	HCCA
BP	GO:0036473	cell death in response to oxidative stress	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042335	cuticle development	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0042631	cellular response to water deprivation	IEP	HCCA
MF	GO:0042887	amide transmembrane transporter activity	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
BP	GO:0043269	regulation of ion transport	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0045088	regulation of innate immune response	IEP	HCCA
BP	GO:0045893	positive regulation of transcription, DNA-templated	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0046173	polyol biosynthetic process	IEP	HCCA
BP	GO:0046283	anthocyanin-containing compound metabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
BP	GO:0046885	regulation of hormone biosynthetic process	IEP	HCCA
BP	GO:0048511	rhythmic process	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
BP	GO:0050776	regulation of immune response	IEP	HCCA
BP	GO:0050801	ion homeostasis	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051480	regulation of cytosolic calcium ion concentration	IEP	HCCA
BP	GO:0051606	detection of stimulus	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0055074	calcium ion homeostasis	IEP	HCCA
BP	GO:0055080	cation homeostasis	IEP	HCCA
BP	GO:0055082	cellular chemical homeostasis	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA
BP	GO:0071214	cellular response to abiotic stimulus	IEP	HCCA
BP	GO:0071229	cellular response to acid chemical	IEP	HCCA
BP	GO:0071462	cellular response to water stimulus	IEP	HCCA
BP	GO:0071478	cellular response to radiation	IEP	HCCA
BP	GO:0071482	cellular response to light stimulus	IEP	HCCA
BP	GO:0071483	cellular response to blue light	IEP	HCCA
BP	GO:0071489	cellular response to red or far red light	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0072503	cellular divalent inorganic cation homeostasis	IEP	HCCA
BP	GO:0072507	divalent inorganic cation homeostasis	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
BP	GO:0090354	regulation of auxin metabolic process	IEP	HCCA
BP	GO:0097468	programmed cell death in response to reactive oxygen species	IEP	HCCA
BP	GO:0104004	cellular response to environmental stimulus	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:1904062	regulation of cation transmembrane transport	IEP	HCCA
MF	GO:1904680	peptide transmembrane transporter activity	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA
BP	GO:2000071	regulation of defense response by callose deposition	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	550	641
IPR005821	Ion_trans_dom	125	449

External Links

PLAZA 3.0 Dicots	AT5G15410

AT5G15410

Expression Profile

Co-expression Networks

Functional Annotation