AT5G20730


Description : Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related


Gene families : OG_01_0000290 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G20730
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Mp1g12750.1 No alias transcription factor (ARF) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_11550V3.1 No alias auxin response factor 6 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0009630 gravitropism RCA Interproscan
BP GO:0009630 gravitropism TAS Interproscan
BP GO:0009638 phototropism IMP Interproscan
BP GO:0009723 response to ethylene IGI Interproscan
BP GO:0009733 response to auxin IMP Interproscan
BP GO:0009733 response to auxin RCA Interproscan
BP GO:0009741 response to brassinosteroid RCA Interproscan
BP GO:0009785 blue light signaling pathway IMP Interproscan
BP GO:0010311 lateral root formation IGI Interproscan
BP GO:0040008 regulation of growth TAS Interproscan
BP GO:0045893 positive regulation of transcription, DNA-templated IMP Interproscan
BP GO:0048366 leaf development IGI Interproscan
BP GO:0048527 lateral root development IGI Interproscan
BP GO:0048527 lateral root development RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000212 meiotic spindle organization IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0000303 response to superoxide IEP HCCA
BP GO:0000305 response to oxygen radical IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
CC GO:0000932 P-body IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0001676 long-chain fatty acid metabolic process IEP HCCA
BP GO:0002213 defense response to insect IEP HCCA
BP GO:0002832 negative regulation of response to biotic stimulus IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004430 1-phosphatidylinositol 4-kinase activity IEP HCCA
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006809 nitric oxide biosynthetic process IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006935 chemotaxis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008553 P-type proton-exporting transporter activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009292 genetic transfer IEP HCCA
BP GO:0009294 DNA mediated transformation IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010101 post-embryonic root morphogenesis IEP HCCA
BP GO:0010102 lateral root morphogenesis IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
BP GO:0010113 negative regulation of systemic acquired resistance IEP HCCA
BP GO:0010183 pollen tube guidance IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0010225 response to UV-C IEP HCCA
BP GO:0010247 detection of phosphate ion IEP HCCA
BP GO:0010256 endomembrane system organization IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
BP GO:0010337 regulation of salicylic acid metabolic process IEP HCCA
BP GO:0010374 stomatal complex development IEP HCCA
BP GO:0010483 pollen tube reception IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0016925 protein sumoylation IEP HCCA
MF GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019789 SUMO transferase activity IEP HCCA
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022610 biological adhesion IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0030659 cytoplasmic vesicle membrane IEP HCCA
MF GO:0030742 GTP-dependent protein binding IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0032102 negative regulation of response to external stimulus IEP HCCA
BP GO:0032957 inositol trisphosphate metabolic process IEP HCCA
MF GO:0033549 MAP kinase phosphatase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP HCCA
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
CC GO:0035619 root hair tip IEP HCCA
CC GO:0035770 ribonucleoprotein granule IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0040011 locomotion IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0042330 taxis IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0043424 protein histidine kinase binding IEP HCCA
MF GO:0043425 bHLH transcription factor binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
CC GO:0043680 filiform apparatus IEP HCCA
MF GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044764 multi-organism cellular process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046209 nitric oxide metabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048468 cell development IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048571 long-day photoperiodism IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048574 long-day photoperiodism, flowering IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0048768 root hair cell tip growth IEP HCCA
BP GO:0050918 positive chemotaxis IEP HCCA
BP GO:0051211 anisotropic cell growth IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0051286 cell tip IEP HCCA
BP GO:0051703 biological process involved in intraspecies interaction between organisms IEP HCCA
MF GO:0052742 phosphatidylinositol kinase activity IEP HCCA
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP HCCA
CC GO:0060187 cell pole IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0090306 meiotic spindle assembly IEP HCCA
BP GO:0090352 regulation of nitrate assimilation IEP HCCA
BP GO:0090436 leaf pavement cell development IEP HCCA
BP GO:0090558 plant epidermis development IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
MF GO:0106018 phosphatidylinositol-3,5-bisphosphate phosphatase activity IEP HCCA
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140297 DNA-binding transcription factor binding IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
BP GO:1903314 regulation of nitrogen cycle metabolic process IEP HCCA
BP GO:2000070 regulation of response to water deprivation IEP HCCA
BP GO:2001057 reactive nitrogen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR010525 ARF_dom 253 336
IPR003340 B3_DNA-bd 127 228
IPR033389 AUX/IAA_dom 1036 1124
PLAZA 3.0 Dicots AT5G20730