1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G23890

AT1G23890


Description : NHL domain-containing protein


Gene families : OG_01_0001648 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001648_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G23890
Cluster HCCA: Cluster_54


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000374 Group III intron splicing IEP HCCA
BP GO:0000706 meiotic DNA double-strand break processing IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
BP GO:0000729 DNA double-strand break processing IEP HCCA
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005838 proteasome regulatory particle IEP HCCA
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006446 regulation of translational initiation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007006 mitochondrial membrane organization IEP HCCA
BP GO:0007007 inner mitochondrial membrane organization IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007140 male meiotic nuclear division IEP HCCA
BP GO:0007143 female meiotic nuclear division IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0016233 telomere capping IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0031048 heterochromatin assembly by small RNA IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034086 maintenance of sister chromatid cohesion IEP HCCA
BP GO:0034090 maintenance of meiotic sister chromatid cohesion IEP HCCA
BP GO:0034249 negative regulation of cellular amide metabolic process IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045039 protein insertion into mitochondrial inner membrane IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045947 negative regulation of translational initiation IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051204 protein insertion into mitochondrial membrane IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:0090151 establishment of protein localization to mitochondrial membrane IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090351 seedling development IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
BP GO:0140013 meiotic nuclear division IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR001258 NHL_repeat 100 126
PLAZA 3.0 Dicots AT1G23890