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  5. AT5G48410

AT5G48410


Description : glutamate receptor 1.3


Gene families : OG_01_0000272 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G48410
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AT2G24710 No alias glutamate receptor 2.3 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G24720 No alias glutamate receptor 2.2 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G11180 No alias glutamate receptor 2.6 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G27100 No alias glutamate receptor 2.1 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005217 intracellular ligand-gated ion channel activity ISS Interproscan
BP GO:0006874 cellular calcium ion homeostasis NAS Interproscan
BP GO:0009416 response to light stimulus NAS Interproscan
BP GO:0030003 cellular cation homeostasis RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000212 meiotic spindle organization IEP HCCA
CC GO:0000932 P-body IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0001046 core promoter sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
BP GO:0002832 negative regulation of response to biotic stimulus IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003995 acyl-CoA dehydrogenase activity IEP HCCA
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004031 aldehyde oxidase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004364 glutathione transferase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004657 proline dehydrogenase activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006560 proline metabolic process IEP HCCA
BP GO:0006561 proline biosynthetic process IEP HCCA
BP GO:0006562 proline catabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006885 regulation of pH IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007568 aging IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008265 Mo-molybdopterin cofactor sulfurase activity IEP HCCA
MF GO:0009000 selenocysteine lyase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009065 glutamine family amino acid catabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009403 toxin biosynthetic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009687 abscisic acid metabolic process IEP HCCA
BP GO:0009688 abscisic acid biosynthetic process IEP HCCA
BP GO:0009700 indole phytoalexin biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010120 camalexin biosynthetic process IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010260 animal organ senescence IEP HCCA
MF GO:0010293 abscisic aldehyde oxidase activity IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
BP GO:0015749 monosaccharide transmembrane transport IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016036 cellular response to phosphate starvation IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016623 oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016783 sulfurtransferase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0018315 molybdenum incorporation into molybdenum-molybdopterin complex IEP HCCA
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0018488 aryl-aldehyde oxidase activity IEP HCCA
BP GO:0019374 galactolipid metabolic process IEP HCCA
BP GO:0019375 galactolipid biosynthetic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
CC GO:0031982 vesicle IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032102 negative regulation of response to external stimulus IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034219 carbohydrate transmembrane transport IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
CC GO:0035770 ribonucleoprotein granule IEP HCCA
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP HCCA
BP GO:0042040 metal incorporation into metallo-molybdopterin complex IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042409 caffeoyl-CoA O-methyltransferase activity IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0042886 amide transport IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0042937 tripeptide transmembrane transporter activity IEP HCCA
BP GO:0042938 dipeptide transport IEP HCCA
BP GO:0042939 tripeptide transport IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043069 negative regulation of programmed cell death IEP HCCA
BP GO:0043200 response to amino acid IEP HCCA
BP GO:0043201 response to leucine IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043288 apocarotenoid metabolic process IEP HCCA
BP GO:0043289 apocarotenoid biosynthetic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045037 protein import into chloroplast stroma IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046217 indole phytoalexin metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0050302 indole-3-acetaldehyde oxidase activity IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050829 defense response to Gram-negative bacterium IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0052033 obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response IEP HCCA
BP GO:0052314 phytoalexin metabolic process IEP HCCA
BP GO:0052315 phytoalexin biosynthetic process IEP HCCA
BP GO:0052317 camalexin metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0080052 response to histidine IEP HCCA
BP GO:0080053 response to phenylalanine IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090306 meiotic spindle assembly IEP HCCA
BP GO:0090333 regulation of stomatal closure IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0098754 detoxification IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
BP GO:1900055 regulation of leaf senescence IEP HCCA
BP GO:1900056 negative regulation of leaf senescence IEP HCCA
BP GO:1900424 regulation of defense response to bacterium IEP HCCA
BP GO:1900425 negative regulation of defense response to bacterium IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1902644 tertiary alcohol metabolic process IEP HCCA
BP GO:1902645 tertiary alcohol biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 467 768
IPR001828 ANF_lig-bd_rcpt 59 387
IPR001320 Iontro_rcpt 769 797
PLAZA 3.0 Dicots AT5G48410