- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
No description available
Gene families : OG_01_0000057 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000057_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G53637 | |
| Cluster | HCCA: Cluster_218 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G16940 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G32020 | No alias | F-box family protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G60400 | No alias | F-box/RNI-like superfamily protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G66640 | No alias | RNI-like superfamily protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G78750 | No alias | F-box/RNI-like superfamily protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G22720 | No alias | F-box/RNI-like superfamily protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G25850 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G44950 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G44970 | No alias | Protein with RNI-like/FBD-like domains | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | HCCA |
| CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | HCCA |
| CC | GO:0005795 | Golgi stack | IEP | HCCA |
| BP | GO:0006333 | chromatin assembly or disassembly | IEP | HCCA |
| BP | GO:0009555 | pollen development | IEP | HCCA |
| MF | GO:0016211 | ammonia ligase activity | IEP | HCCA |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | HCCA |
| BP | GO:0048229 | gametophyte development | IEP | HCCA |
| CC | GO:0048500 | signal recognition particle | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT5G53637 |