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  5. AT5G59690

AT5G59690


Description : Histone superfamily protein


Gene families : OG_01_0000034 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G59690
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264600 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265200 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g266600 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g268000 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g268400 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g271300 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274300 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274900 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g275700 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276650 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276800 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504850 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g570000 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g708200 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g708650 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g710500 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g711800 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g713500 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714000 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714600 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g03090.1 No alias histone (H4) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g13440.1 No alias histone (H4) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g16840.1 No alias histone (H4) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g22460.1 No alias histone (H4) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g22470.1 No alias histone (H4) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_22340V3.1 No alias histone H4 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_22160V3.1 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_22150V3.1 No alias histone H4 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11997.1 No alias histone (H4) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0009579 thylakoid IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0001763 morphogenesis of a branching structure IEP HCCA
MF GO:0001872 (1->3)-beta-D-glucan binding IEP HCCA
BP GO:0003156 regulation of animal organ formation IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005640 nuclear outer membrane IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006279 premeiotic DNA replication IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010160 formation of animal organ boundary IEP HCCA
BP GO:0010223 secondary shoot formation IEP HCCA
BP GO:0010346 shoot axis formation IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0016048 detection of temperature stimulus IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016572 histone phosphorylation IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0022625 cytosolic large ribosomal subunit IEP HCCA
CC GO:0030054 cell junction IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030337 DNA polymerase processivity factor activity IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
CC GO:0031965 nuclear membrane IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033260 nuclear DNA replication IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044030 regulation of DNA methylation IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
CC GO:0046658 anchored component of plasma membrane IEP HCCA
BP GO:0048504 regulation of timing of animal organ formation IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
BP GO:2000027 regulation of animal organ morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
PLAZA 3.0 Dicots AT5G59690