AT5G60920


Description : COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family


Gene families : OG_01_0000704 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G60920
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AT5G15630 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g06600.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_4550V3.1 No alias COBRA-like protein 1 precursor 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_16270V3.1 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_9820V3.1 No alias COBRA-like protein 1 precursor 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_00321.1 No alias regulatory protein (COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process RCA Interproscan
BP GO:0000272 polysaccharide catabolic process RCA Interproscan
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0005982 starch metabolic process RCA Interproscan
BP GO:0006096 glycolytic process RCA Interproscan
BP GO:0006816 calcium ion transport RCA Interproscan
BP GO:0006833 water transport RCA Interproscan
BP GO:0006972 hyperosmotic response RCA Interproscan
BP GO:0007030 Golgi organization RCA Interproscan
BP GO:0007389 pattern specification process RCA Interproscan
BP GO:0008361 regulation of cell size RCA Interproscan
BP GO:0009266 response to temperature stimulus RCA Interproscan
CC GO:0009505 plant-type cell wall IDA Interproscan
BP GO:0009651 response to salt stress IMP Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0009664 plant-type cell wall organization RCA Interproscan
BP GO:0009750 response to fructose RCA Interproscan
BP GO:0009825 multidimensional cell growth IMP Interproscan
BP GO:0009825 multidimensional cell growth RCA Interproscan
BP GO:0009832 plant-type cell wall biogenesis RCA Interproscan
CC GO:0009897 external side of plasma membrane ISS Interproscan
BP GO:0009926 auxin polar transport RCA Interproscan
CC GO:0009930 longitudinal side of cell surface IDA Interproscan
BP GO:0009932 cell tip growth RCA Interproscan
BP GO:0010015 root morphogenesis RCA Interproscan
BP GO:0010215 cellulose microfibril organization IMP Interproscan
BP GO:0010817 regulation of hormone levels RCA Interproscan
BP GO:0016049 cell growth RCA Interproscan
BP GO:0030243 cellulose metabolic process RCA Interproscan
CC GO:0031225 anchored component of membrane TAS Interproscan
BP GO:0040007 growth RCA Interproscan
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light RCA Interproscan
CC GO:0046658 anchored component of plasma membrane IDA Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
BP GO:0048767 root hair elongation RCA Interproscan
BP GO:0071555 cell wall organization RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
MF GO:0002020 protease binding IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005457 GDP-fucose transmembrane transporter activity IEP HCCA
MF GO:0005459 UDP-galactose transmembrane transporter activity IEP HCCA
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005769 early endosome IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006521 regulation of cellular amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008705 methionine synthase activity IEP HCCA
MF GO:0008810 cellulase activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
BP GO:0009833 plant-type primary cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
CC GO:0009986 cell surface IEP HCCA
CC GO:0010005 cortical microtubule, transverse to long axis IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
CC GO:0010330 cellulose synthase complex IEP HCCA
BP GO:0010337 regulation of salicylic acid metabolic process IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
MF GO:0010427 abscisic acid binding IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015075 ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015783 GDP-fucose transmembrane transport IEP HCCA
BP GO:0015786 UDP-glucose transmembrane transport IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP HCCA
BP GO:0015986 ATP synthesis coupled proton transport IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016328 lateral plasma membrane IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0019840 isoprenoid binding IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022610 biological adhesion IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0030308 negative regulation of cell growth IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032119 sequestering of zinc ion IEP HCCA
BP GO:0032350 regulation of hormone metabolic process IEP HCCA
BP GO:0032352 positive regulation of hormone metabolic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032876 negative regulation of DNA endoreduplication IEP HCCA
BP GO:0033238 regulation of cellular amine metabolic process IEP HCCA
BP GO:0033240 positive regulation of cellular amine metabolic process IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034220 ion transmembrane transport IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036080 purine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0043181 vacuolar sequestering IEP HCCA
CC GO:0043230 extracellular organelle IEP HCCA
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
CC GO:0045298 tubulin complex IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0045489 pectin biosynthetic process IEP HCCA
BP GO:0045764 positive regulation of cellular amino acid metabolic process IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0047513 1,2-alpha-L-fucosidase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048766 root hair initiation IEP HCCA
BP GO:0048768 root hair cell tip growth IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
MF GO:0050378 UDP-glucuronate 4-epimerase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051238 sequestering of metal ion IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
CC GO:0055028 cortical microtubule IEP HCCA
BP GO:0060776 simple leaf morphogenesis IEP HCCA
BP GO:0062012 regulation of small molecule metabolic process IEP HCCA
BP GO:0062013 positive regulation of small molecule metabolic process IEP HCCA
CC GO:0065010 extracellular membrane-bounded organelle IEP HCCA
CC GO:0070062 extracellular exosome IEP HCCA
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071258 cellular response to gravity IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0072334 UDP-galactose transmembrane transport IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
BP GO:0080163 regulation of protein serine/threonine phosphatase activity IEP HCCA
BP GO:0090354 regulation of auxin metabolic process IEP HCCA
BP GO:0090355 positive regulation of auxin metabolic process IEP HCCA
BP GO:0090357 regulation of tryptophan metabolic process IEP HCCA
BP GO:0090358 positive regulation of tryptophan metabolic process IEP HCCA
BP GO:0090480 purine nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:0120178 steroid hormone biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
CC GO:1903561 extracellular vesicle IEP HCCA
BP GO:2000038 regulation of stomatal complex development IEP HCCA
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR006918 COBRA_pln 60 223
PLAZA 3.0 Dicots AT5G60920