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  5. AT1G28140

AT1G28140


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).


Gene families : OG_01_0007385 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G28140
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Mp5g05330.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_12800V3.1 No alias No annotation 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004462 lactoylglutathione lyase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005982 starch metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008422 beta-glucosidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid family metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
CC GO:0009368 endopeptidase Clp complex IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009423 chorismate biosynthetic process IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0009668 plastid membrane organization IEP HCCA
BP GO:0009704 de-etiolation IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
CC GO:0009840 chloroplastic endopeptidase Clp complex IEP HCCA
BP GO:0009853 photorespiration IEP HCCA
BP GO:0009902 chloroplast relocation IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
MF GO:0009977 proton motive force dependent protein transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010020 chloroplast fission IEP HCCA
BP GO:0010027 thylakoid membrane organization IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
CC GO:0010319 stromule IEP HCCA
BP GO:0010478 chlororespiration IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016143 S-glycoside metabolic process IEP HCCA
BP GO:0016144 S-glycoside biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
BP GO:0017014 protein nitrosylation IEP HCCA
BP GO:0018119 peptidyl-cysteine S-nitrosylation IEP HCCA
BP GO:0018131 oxazole or thiazole biosynthetic process IEP HCCA
BP GO:0018198 peptidyl-cysteine modification IEP HCCA
BP GO:0019252 starch biosynthetic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0019750 chloroplast localization IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0030091 protein repair IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0031360 intrinsic component of thylakoid membrane IEP HCCA
CC GO:0031361 integral component of thylakoid membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
CC GO:0031975 envelope IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
CC GO:0033281 TAT protein transport complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of ion transmembrane transport IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043235 receptor complex IEP HCCA
BP GO:0043269 regulation of ion transport IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043572 plastid fission IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046417 chorismate metabolic process IEP HCCA
BP GO:0046484 oxazole or thiazole metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051644 plastid localization IEP HCCA
BP GO:0051656 establishment of organelle localization IEP HCCA
BP GO:0051667 establishment of plastid localization IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080005 photosystem stoichiometry adjustment IEP HCCA
MF GO:0080079 cellobiose glucosidase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901659 glycosyl compound biosynthetic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
BP GO:1904062 regulation of cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR019275 DUF2301 121 259
PLAZA 3.0 Dicots AT1G28140