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  5. AT1G42960

AT1G42960


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 120 Blast hits to 120 proteins in 39 species: Archae - 0; Bacteria - 43; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG_01_0002476 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002476_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G42960
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278195 No alias No description available 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009536 plastid IDA Interproscan
CC GO:0009706 chloroplast inner membrane IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
CC GO:0016020 membrane IDA Interproscan
BP GO:0019344 cysteine biosynthetic process RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000036 acyl carrier activity IEP HCCA
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000820 regulation of glutamine family amino acid metabolic process IEP HCCA
BP GO:0000821 regulation of arginine metabolic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004017 adenylate kinase activity IEP HCCA
MF GO:0004075 biotin carboxylase activity IEP HCCA
MF GO:0004076 biotin synthase activity IEP HCCA
MF GO:0004148 dihydrolipoyl dehydrogenase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP HCCA
MF GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity IEP HCCA
MF GO:0004318 enoyl-[acyl-carrier-protein] reductase (NADH) activity IEP HCCA
MF GO:0004738 pyruvate dehydrogenase activity IEP HCCA
MF GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity IEP HCCA
MF GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity IEP HCCA
MF GO:0004801 transaldolase activity IEP HCCA
MF GO:0005504 fatty acid binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005835 fatty acid synthase complex IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006085 acetyl-CoA biosynthetic process IEP HCCA
BP GO:0006086 acetyl-CoA biosynthetic process from pyruvate IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006521 regulation of cellular amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006733 obsolete oxidoreduction coenzyme metabolic process IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006768 biotin metabolic process IEP HCCA
BP GO:0006775 fat-soluble vitamin metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 cellular amino acid catabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid family metabolic process IEP HCCA
BP GO:0009102 biotin biosynthetic process IEP HCCA
BP GO:0009106 lipoate metabolic process IEP HCCA
BP GO:0009107 lipoate biosynthetic process IEP HCCA
BP GO:0009108 obsolete coenzyme biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0009374 biotin binding IEP HCCA
BP GO:0009409 response to cold IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009694 jasmonic acid metabolic process IEP HCCA
BP GO:0009695 jasmonic acid biosynthetic process IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009804 coumarin metabolic process IEP HCCA
BP GO:0009805 coumarin biosynthetic process IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0010020 chloroplast fission IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
CC GO:0010240 plastid pyruvate dehydrogenase complex IEP HCCA
MF GO:0010307 acetylglutamate kinase regulator activity IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015114 phosphate ion transmembrane transporter activity IEP HCCA
MF GO:0015120 phosphoglycerate transmembrane transporter activity IEP HCCA
MF GO:0015121 phosphoenolpyruvate:phosphate antiporter activity IEP HCCA
MF GO:0015301 anion:anion antiporter activity IEP HCCA
MF GO:0015315 organophosphate:inorganic phosphate antiporter activity IEP HCCA
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015713 phosphoglycerate transmembrane transport IEP HCCA
BP GO:0015714 phosphoenolpyruvate transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016417 S-acyltransferase activity IEP HCCA
MF GO:0016418 S-acetyltransferase activity IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016631 enoyl-[acyl-carrier-protein] reductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016783 sulfurtransferase activity IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0016992 lipoate synthase activity IEP HCCA
BP GO:0017014 protein nitrosylation IEP HCCA
BP GO:0018119 peptidyl-cysteine S-nitrosylation IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018198 peptidyl-cysteine modification IEP HCCA
MF GO:0019171 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
BP GO:0019217 regulation of fatty acid metabolic process IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0022626 cytosolic ribosome IEP HCCA
MF GO:0030523 dihydrolipoamide S-acyltransferase activity IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033238 regulation of cellular amine metabolic process IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
BP GO:0033559 unsaturated fatty acid metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0035384 thioester biosynthetic process IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0042304 regulation of fatty acid biosynthetic process IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042371 vitamin K biosynthetic process IEP HCCA
BP GO:0042372 phylloquinone biosynthetic process IEP HCCA
BP GO:0042373 vitamin K metabolic process IEP HCCA
BP GO:0042374 phylloquinone metabolic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
BP GO:0042873 aldonate transmembrane transport IEP HCCA
MF GO:0042879 aldonate transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0043572 plastid fission IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
MF GO:0044620 ACP phosphopantetheine attachment site binding IEP HCCA
CC GO:0045254 pyruvate dehydrogenase complex IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046890 regulation of lipid biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0047450 crotonoyl-[acyl-carrier-protein] hydratase activity IEP HCCA
MF GO:0047617 acyl-CoA hydrolase activity IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
MF GO:0051192 prosthetic group binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071616 acyl-CoA biosynthetic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0089721 phosphoenolpyruvate transmembrane transporter activity IEP HCCA
BP GO:0090368 regulation of ornithine metabolic process IEP HCCA
BP GO:0098656 anion transmembrane transport IEP HCCA
BP GO:0120178 steroid hormone biosynthetic process IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140323 solute:anion antiporter activity IEP HCCA
MF GO:0140414 phosphopantetheine-dependent carrier activity IEP HCCA
BP GO:1900079 regulation of arginine biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:2000013 regulation of arginine biosynthetic process via ornithine IEP HCCA
BP GO:2000282 regulation of cellular amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT1G42960