AT1G44110


Description : Cyclin A1;1


Gene families : OG_01_0000217 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G44110
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Cre03.g207900 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g25500.1 No alias cyclin (CYCA) 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_38770V3.1 No alias Cyclin A1;1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_39040V3.1 No alias Cyclin A1;1 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_8700V3.1 No alias Cyclin A1;1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_8770V3.1 No alias Cyclin A1;1 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_8780V3.1 No alias Cyclin A1;1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_9020V3.1 No alias Cyclin A1;1 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_06721.2 No alias regulatory protein (CYCA) of cell cycle 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0006260 DNA replication RCA Interproscan
BP GO:0006270 DNA replication initiation RCA Interproscan
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0006306 DNA methylation RCA Interproscan
BP GO:0008283 cell population proliferation RCA Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0010103 stomatal complex morphogenesis RCA Interproscan
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle RCA Interproscan
BP GO:0010583 response to cyclopentenone IEP Interproscan
BP GO:0010583 response to cyclopentenone RCA Interproscan
BP GO:0016458 obsolete gene silencing RCA Interproscan
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity ISS Interproscan
BP GO:0016572 histone phosphorylation RCA Interproscan
BP GO:0034968 histone lysine methylation RCA Interproscan
BP GO:0042127 regulation of cell population proliferation RCA Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
BP GO:0051726 regulation of cell cycle ISS Interproscan
BP GO:0051726 regulation of cell cycle RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000018 regulation of DNA recombination IEP HCCA
MF GO:0000030 mannosyltransferase activity IEP HCCA
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000212 meiotic spindle organization IEP HCCA
MF GO:0000217 DNA secondary structure binding IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000228 nuclear chromosome IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
MF GO:0000400 four-way junction DNA binding IEP HCCA
MF GO:0000403 Y-form DNA binding IEP HCCA
MF GO:0000404 heteroduplex DNA loop binding IEP HCCA
MF GO:0000406 double-strand/single-strand DNA junction binding IEP HCCA
BP GO:0000710 meiotic mismatch repair IEP HCCA
BP GO:0000712 resolution of meiotic recombination intermediates IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
CC GO:0000793 condensed chromosome IEP HCCA
CC GO:0000794 condensed nuclear chromosome IEP HCCA
CC GO:0000795 synaptonemal complex IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
BP GO:0000819 sister chromatid segregation IEP HCCA
BP GO:0000912 assembly of actomyosin apparatus involved in cytokinesis IEP HCCA
BP GO:0000914 phragmoplast assembly IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004034 aldose 1-epimerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005871 kinesin complex IEP HCCA
CC GO:0005872 minus-end kinesin complex IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
CC GO:0005876 spindle microtubule IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006268 DNA unwinding involved in DNA replication IEP HCCA
BP GO:0006279 premeiotic DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006290 pyrimidine dimer repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006311 meiotic gene conversion IEP HCCA
BP GO:0006323 DNA packaging IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007053 spindle assembly involved in male meiosis IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP HCCA
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007349 cellularization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0008285 negative regulation of cell population proliferation IEP HCCA
MF GO:0008569 minus-end-directed microtubule motor activity IEP HCCA
MF GO:0008574 plus-end-directed microtubule motor activity IEP HCCA
CC GO:0009330 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009558 embryo sac cellularization IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009957 epidermal cell fate specification IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0009971 anastral spindle assembly involved in male meiosis IEP HCCA
BP GO:0010342 endosperm cellularization IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
BP GO:0010376 stomatal complex formation IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010520 regulation of reciprocal meiotic recombination IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0010965 regulation of mitotic sister chromatid separation IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016048 detection of temperature stimulus IEP HCCA
BP GO:0016246 RNA interference IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016441 posttranscriptional gene silencing IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018107 peptidyl-threonine phosphorylation IEP HCCA
BP GO:0018210 peptidyl-threonine modification IEP HCCA
MF GO:0019187 beta-1,4-mannosyltransferase activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
BP GO:0031048 heterochromatin assembly by small RNA IEP HCCA
BP GO:0031109 microtubule polymerization or depolymerization IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
CC GO:0031261 DNA replication preinitiation complex IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
BP GO:0031577 spindle checkpoint signaling IEP HCCA
MF GO:0032135 DNA insertion or deletion binding IEP HCCA
MF GO:0032137 guanine/thymine mispair binding IEP HCCA
MF GO:0032138 single base insertion or deletion binding IEP HCCA
CC GO:0032300 mismatch repair complex IEP HCCA
CC GO:0032301 MutSalpha complex IEP HCCA
CC GO:0032302 MutSbeta complex IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032506 cytokinetic process IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033046 negative regulation of sister chromatid segregation IEP HCCA
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0033260 nuclear DNA replication IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
MF GO:0035173 histone kinase activity IEP HCCA
MF GO:0035184 histone threonine kinase activity IEP HCCA
BP GO:0035194 post-transcriptional gene silencing by RNA IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
MF GO:0035402 histone kinase activity (H3-T11 specific) IEP HCCA
BP GO:0035405 histone-threonine phosphorylation IEP HCCA
BP GO:0035407 histone H3-T11 phosphorylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0035822 gene conversion IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0040020 regulation of meiotic nuclear division IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043570 maintenance of DNA repeat elements IEP HCCA
BP GO:0044030 regulation of DNA methylation IEP HCCA
BP GO:0044774 mitotic DNA integrity checkpoint signaling IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0045128 negative regulation of reciprocal meiotic recombination IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0045835 negative regulation of meiotic nuclear division IEP HCCA
BP GO:0045839 negative regulation of mitotic nuclear division IEP HCCA
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0045910 negative regulation of DNA recombination IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
CC GO:0046658 anchored component of plasma membrane IEP HCCA
BP GO:0046785 microtubule polymerization IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051447 negative regulation of meiotic cell cycle IEP HCCA
MF GO:0051753 mannan synthase activity IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051784 negative regulation of nuclear division IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0051985 negative regulation of chromosome segregation IEP HCCA
BP GO:0055046 microgametogenesis IEP HCCA
BP GO:0055048 anastral spindle assembly IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071173 spindle assembly checkpoint signaling IEP HCCA
BP GO:0071174 mitotic spindle checkpoint signaling IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0072354 histone kinase activity (H3-T3 specific) IEP HCCA
BP GO:0072355 histone H3-T3 phosphorylation IEP HCCA
BP GO:0080175 phragmoplast microtubule organization IEP HCCA
BP GO:0090306 meiotic spindle assembly IEP HCCA
BP GO:0090329 regulation of DNA-dependent DNA replication IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099086 synaptonemal structure IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis IEP HCCA
BP GO:1902410 mitotic cytokinetic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:1905818 regulation of chromosome separation IEP HCCA
BP GO:1905819 negative regulation of chromosome separation IEP HCCA
CC GO:1990391 DNA repair complex IEP HCCA
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP HCCA
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 197 323
IPR004367 Cyclin_C-dom 326 445
PLAZA 3.0 Dicots AT1G44110