AT1G44900


Description : minichromosome maintenance (MCM2/3/5) family protein


Gene families : OG_01_0006927 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006927_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G44900
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Cre07.g338000 No alias Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g00130.1 No alias component MCM2 of MCM replicative DNA helicase complex 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_34820V3.1 No alias minichromosome maintenance (MCM2/3/5) family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0005524 ATP binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006084 acetyl-CoA metabolic process RCA Interproscan
BP GO:0006260 DNA replication RCA Interproscan
BP GO:0006261 DNA-dependent DNA replication RCA Interproscan
BP GO:0006268 DNA unwinding involved in DNA replication TAS Interproscan
BP GO:0006270 DNA replication initiation ISS Interproscan
BP GO:0006270 DNA replication initiation RCA Interproscan
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0006306 DNA methylation RCA Interproscan
MF GO:0008094 ATP-dependent activity, acting on DNA ISS Interproscan
BP GO:0008283 cell population proliferation IEP Interproscan
BP GO:0008283 cell population proliferation RCA Interproscan
BP GO:0009165 nucleotide biosynthetic process RCA Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0010082 regulation of root meristem growth IMP Interproscan
BP GO:0034968 histone lysine methylation RCA Interproscan
BP GO:0042127 regulation of cell population proliferation IMP Interproscan
BP GO:0048364 root development IMP Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
BP GO:0051726 regulation of cell cycle RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP HCCA
BP GO:0000018 regulation of DNA recombination IEP HCCA
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000076 DNA replication checkpoint signaling IEP HCCA
BP GO:0000212 meiotic spindle organization IEP HCCA
MF GO:0000217 DNA secondary structure binding IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000228 nuclear chromosome IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000281 mitotic cytokinesis IEP HCCA
MF GO:0000400 four-way junction DNA binding IEP HCCA
MF GO:0000403 Y-form DNA binding IEP HCCA
MF GO:0000404 heteroduplex DNA loop binding IEP HCCA
MF GO:0000406 double-strand/single-strand DNA junction binding IEP HCCA
BP GO:0000710 meiotic mismatch repair IEP HCCA
BP GO:0000712 resolution of meiotic recombination intermediates IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
CC GO:0000793 condensed chromosome IEP HCCA
CC GO:0000794 condensed nuclear chromosome IEP HCCA
CC GO:0000795 synaptonemal complex IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
BP GO:0000819 sister chromatid segregation IEP HCCA
BP GO:0000912 assembly of actomyosin apparatus involved in cytokinesis IEP HCCA
BP GO:0000914 phragmoplast assembly IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005657 replication fork IEP HCCA
CC GO:0005658 alpha DNA polymerase:primase complex IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005871 kinesin complex IEP HCCA
CC GO:0005872 minus-end kinesin complex IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
CC GO:0005971 ribonucleoside-diphosphate reductase complex IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006266 DNA ligation IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006271 DNA strand elongation involved in DNA replication IEP HCCA
BP GO:0006279 premeiotic DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006290 pyrimidine dimer repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006311 meiotic gene conversion IEP HCCA
BP GO:0006323 DNA packaging IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0006349 regulation of gene expression by genetic imprinting IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006471 protein ADP-ribosylation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007053 spindle assembly involved in male meiosis IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0007349 cellularization IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0008285 negative regulation of cell population proliferation IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
MF GO:0008569 minus-end-directed microtubule motor activity IEP HCCA
MF GO:0008574 plus-end-directed microtubule motor activity IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
CC GO:0009330 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex IEP HCCA
BP GO:0009411 response to UV IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0009934 regulation of meristem structural organization IEP HCCA
BP GO:0009957 epidermal cell fate specification IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0009971 anastral spindle assembly involved in male meiosis IEP HCCA
BP GO:0010069 zygote asymmetric cytokinesis in embryo sac IEP HCCA
BP GO:0010070 zygote asymmetric cell division IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010216 maintenance of DNA methylation IEP HCCA
BP GO:0010224 response to UV-B IEP HCCA
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP HCCA
BP GO:0010342 endosperm cellularization IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010424 DNA methylation on cytosine within a CG sequence IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010520 regulation of reciprocal meiotic recombination IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0016246 RNA interference IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016572 histone phosphorylation IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022616 DNA strand elongation IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030337 DNA polymerase processivity factor activity IEP HCCA
BP GO:0030422 production of siRNA involved in RNA interference IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
BP GO:0031048 heterochromatin assembly by small RNA IEP HCCA
BP GO:0031050 dsRNA processing IEP HCCA
BP GO:0031109 microtubule polymerization or depolymerization IEP HCCA
CC GO:0031261 DNA replication preinitiation complex IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
MF GO:0032135 DNA insertion or deletion binding IEP HCCA
MF GO:0032137 guanine/thymine mispair binding IEP HCCA
MF GO:0032138 single base insertion or deletion binding IEP HCCA
CC GO:0032300 mismatch repair complex IEP HCCA
CC GO:0032301 MutSalpha complex IEP HCCA
CC GO:0032302 MutSbeta complex IEP HCCA
BP GO:0032411 positive regulation of transporter activity IEP HCCA
BP GO:0032414 positive regulation of ion transmembrane transporter activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032506 cytokinetic process IEP HCCA
BP GO:0032776 DNA methylation on cytosine IEP HCCA
BP GO:0032876 negative regulation of DNA endoreduplication IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033260 nuclear DNA replication IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034764 positive regulation of transmembrane transport IEP HCCA
BP GO:0034767 positive regulation of ion transmembrane transport IEP HCCA
BP GO:0035194 post-transcriptional gene silencing by RNA IEP HCCA
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP HCCA
BP GO:0035822 gene conversion IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0040020 regulation of meiotic nuclear division IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043270 positive regulation of ion transport IEP HCCA
BP GO:0043570 maintenance of DNA repeat elements IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044774 mitotic DNA integrity checkpoint signaling IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0045128 negative regulation of reciprocal meiotic recombination IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0045835 negative regulation of meiotic nuclear division IEP HCCA
BP GO:0045910 negative regulation of DNA recombination IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
BP GO:0046785 microtubule polymerization IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048314 embryo sac morphogenesis IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048768 root hair cell tip growth IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0051050 positive regulation of transport IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051447 negative regulation of meiotic cell cycle IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051784 negative regulation of nuclear division IEP HCCA
BP GO:0055046 microgametogenesis IEP HCCA
BP GO:0055048 anastral spindle assembly IEP HCCA
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071514 genetic imprinting IEP HCCA
BP GO:0071588 hydrogen peroxide mediated signaling pathway IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0080175 phragmoplast microtubule organization IEP HCCA
BP GO:0090306 meiotic spindle assembly IEP HCCA
BP GO:0090329 regulation of DNA-dependent DNA replication IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099086 synaptonemal structure IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement IEP HCCA
BP GO:1901528 hydrogen peroxide mediated signaling pathway involved in stomatal movement IEP HCCA
BP GO:1901529 positive regulation of anion channel activity IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis IEP HCCA
BP GO:1902410 mitotic cytokinetic process IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1903793 positive regulation of anion transport IEP HCCA
BP GO:1903961 positive regulation of anion transmembrane transport IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990391 DNA repair complex IEP HCCA
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR027925 MCM_N 220 312
IPR033762 MCM_OB 319 446
IPR001208 MCM_dom 487 709
IPR008045 MCM2 40 191
PLAZA 3.0 Dicots AT1G44900