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  5. Cre10.g439000

Cre10.g439000


Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter


Gene families : OG_01_0003647 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g439000
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AT1G54350 No alias ABC transporter family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g18020.1 No alias subfamily ABCD transporter 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_21800V3.1 No alias ABC transporter family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_11470V3.1 No alias ABC transporter family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 82 335
IPR003439 ABC_transporter-like_ATP-bd 502 718
No external refs found!