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  5. Cre10.g455850

Cre10.g455850


Description : Cell cycle.interphase.DNA replication.preinitiation.MCM replicative DNA helicase complex.MCM7 component


Gene families : OG_01_0007103 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g455850
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT4G02060 No alias Minichromosome maintenance (MCM2/3/5) family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g02600.1 No alias component MCM7 of MCM replicative DNA helicase complex 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_23510V3.1 No alias Minichromosome maintenance (MCM2/3/5) family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_04767.1 No alias no annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000444 MIS12/MIND type complex IEP HCCA
CC GO:0000818 nuclear MIS12/MIND complex IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004146 dihydrofolate reductase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010824 regulation of centrosome duplication IEP HCCA
BP GO:0010826 negative regulation of centrosome duplication IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
BP GO:0030030 cell projection organization IEP HCCA
BP GO:0030031 cell projection assembly IEP HCCA
BP GO:0032886 regulation of microtubule-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0036038 MKS complex IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044782 cilium organization IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0046605 regulation of centrosome cycle IEP HCCA
BP GO:0046606 negative regulation of centrosome cycle IEP HCCA
BP GO:0046653 tetrahydrofolate metabolic process IEP HCCA
BP GO:0046654 tetrahydrofolate biosynthetic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060271 cilium assembly IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0120031 plasma membrane bounded cell projection assembly IEP HCCA
BP GO:0120036 plasma membrane bounded cell projection organization IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001208 MCM_dom 350 571
IPR027925 MCM_N 17 144
IPR033762 MCM_OB 178 306
No external refs found!