Coexpression cluster: Cluster_137 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006270 DNA replication initiation 5.45% (3/55) 6.75 2e-06 0.000367
GO:0006996 organelle organization 7.27% (4/55) 5.09 6e-06 0.000443
GO:0006259 DNA metabolic process 9.09% (5/55) 4.15 9e-06 0.000473
GO:0003677 DNA binding 12.73% (7/55) 3.05 2e-05 0.000783
GO:0000226 microtubule cytoskeleton organization 3.64% (2/55) 7.75 2.8e-05 0.000887
GO:0022402 cell cycle process 3.64% (2/55) 6.53 0.000196 0.004401
GO:0016043 cellular component organization 7.27% (4/55) 3.83 0.000181 0.004733
GO:0071840 cellular component organization or biogenesis 7.27% (4/55) 3.65 0.000291 0.005078
GO:0007010 cytoskeleton organization 3.64% (2/55) 6.33 0.000261 0.005124
GO:0003924 GTPase activity 5.45% (3/55) 4.22 0.00056 0.008785
GO:0003676 nucleic acid binding 14.55% (8/55) 2.03 0.000682 0.009728
GO:0005876 spindle microtubule 1.82% (1/55) 8.33 0.0031 0.024336
GO:0046653 tetrahydrofolate metabolic process 1.82% (1/55) 8.33 0.0031 0.024336
GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity 1.82% (1/55) 8.33 0.0031 0.024336
GO:0004146 dihydrofolate reductase activity 1.82% (1/55) 8.33 0.0031 0.024336
GO:0046654 tetrahydrofolate biosynthetic process 1.82% (1/55) 8.33 0.0031 0.024336
GO:0000940 outer kinetochore 1.82% (1/55) 8.33 0.0031 0.024336
GO:0034453 microtubule anchoring 1.82% (1/55) 8.33 0.0031 0.024336
GO:0017111 nucleoside-triphosphatase activity 5.45% (3/55) 3.0 0.006272 0.024619
GO:0030554 adenyl nucleotide binding 14.55% (8/55) 1.65 0.003649 0.024909
GO:0051225 spindle assembly 1.82% (1/55) 7.33 0.006191 0.024922
GO:0009396 folic acid-containing compound biosynthetic process 1.82% (1/55) 7.33 0.006191 0.024922
GO:0031390 Ctf18 RFC-like complex 1.82% (1/55) 7.33 0.006191 0.024922
GO:0006275 regulation of DNA replication 1.82% (1/55) 7.33 0.006191 0.024922
GO:0007051 spindle organization 1.82% (1/55) 7.33 0.006191 0.024922
GO:0031023 microtubule organizing center organization 1.82% (1/55) 7.33 0.006191 0.024922
GO:0099512 supramolecular fiber 1.82% (1/55) 7.33 0.006191 0.024922
GO:0019887 protein kinase regulator activity 1.82% (1/55) 7.33 0.006191 0.024922
GO:0099513 polymeric cytoskeletal fiber 1.82% (1/55) 7.33 0.006191 0.024922
GO:0019207 kinase regulator activity 1.82% (1/55) 7.33 0.006191 0.024922
GO:0005874 microtubule 1.82% (1/55) 7.33 0.006191 0.024922
GO:0007059 chromosome segregation 1.82% (1/55) 7.33 0.006191 0.024922
GO:0099081 supramolecular polymer 1.82% (1/55) 7.33 0.006191 0.024922
GO:0051276 chromosome organization 3.64% (2/55) 4.94 0.001908 0.024966
GO:0032559 adenyl ribonucleotide binding 14.55% (8/55) 1.65 0.003569 0.02547
GO:0140694 non-membrane-bounded organelle assembly 1.82% (1/55) 6.75 0.009272 0.025539
GO:0099080 supramolecular complex 1.82% (1/55) 6.75 0.009272 0.025539
GO:0006760 folic acid-containing compound metabolic process 1.82% (1/55) 6.75 0.009272 0.025539
GO:0007064 mitotic sister chromatid cohesion 1.82% (1/55) 6.75 0.009272 0.025539
GO:0051301 cell division 1.82% (1/55) 6.75 0.009272 0.025539
GO:0007062 sister chromatid cohesion 1.82% (1/55) 6.75 0.009272 0.025539
GO:0005815 microtubule organizing center 1.82% (1/55) 6.75 0.009272 0.025539
GO:0005524 ATP binding 14.55% (8/55) 1.66 0.003464 0.025901
GO:0097367 carbohydrate derivative binding 14.55% (8/55) 1.45 0.008278 0.025993
GO:1901360 organic cyclic compound metabolic process 10.91% (6/55) 1.82 0.006797 0.026027
GO:0009987 cellular process 25.45% (14/55) 0.99 0.008137 0.026072
GO:0016817 hydrolase activity, acting on acid anhydrides 5.45% (3/55) 2.86 0.008134 0.026605
GO:0016462 pyrophosphatase activity 5.45% (3/55) 2.9 0.007641 0.02666
GO:0032553 ribonucleotide binding 14.55% (8/55) 1.46 0.008028 0.026817
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.45% (3/55) 2.87 0.007968 0.027194
GO:0017076 purine nucleotide binding 14.55% (8/55) 1.47 0.00764 0.027261
GO:0035639 purine ribonucleoside triphosphate binding 14.55% (8/55) 1.48 0.007312 0.027334
GO:0032555 purine ribonucleotide binding 14.55% (8/55) 1.47 0.007498 0.027377
GO:0090304 nucleic acid metabolic process 9.09% (5/55) 2.43 0.002298 0.027747
GO:0044260 cellular macromolecule metabolic process 16.36% (9/55) 1.48 0.004445 0.029075
GO:0007017 microtubule-based process 3.64% (2/55) 3.66 0.010917 0.029552
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity 1.82% (1/55) 6.33 0.012344 0.030762
GO:1903047 mitotic cell cycle process 1.82% (1/55) 6.33 0.012344 0.030762
GO:0042559 pteridine-containing compound biosynthetic process 1.82% (1/55) 6.33 0.012344 0.030762
GO:0097159 organic cyclic compound binding 20.0% (11/55) 1.1 0.011765 0.030785
GO:1901363 heterocyclic compound binding 20.0% (11/55) 1.1 0.011765 0.030785
GO:1901265 nucleoside phosphate binding 14.55% (8/55) 1.33 0.013061 0.03107
GO:0043168 anion binding 14.55% (8/55) 1.33 0.013061 0.03107
GO:0000166 nucleotide binding 14.55% (8/55) 1.33 0.013061 0.03107
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors 1.82% (1/55) 6.01 0.015407 0.034555
GO:0042558 pteridine-containing compound metabolic process 1.82% (1/55) 6.01 0.015407 0.034555
GO:0070925 organelle assembly 1.82% (1/55) 6.01 0.015407 0.034555
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 1.82% (1/55) 6.01 0.015407 0.034555
GO:0034641 cellular nitrogen compound metabolic process 10.91% (6/55) 1.56 0.015684 0.034682
GO:0046483 heterocycle metabolic process 10.91% (6/55) 1.86 0.006064 0.036619
GO:0006725 cellular aromatic compound metabolic process 10.91% (6/55) 1.86 0.005904 0.037076
GO:0036094 small molecule binding 14.55% (8/55) 1.26 0.01717 0.037439
GO:0006139 nucleobase-containing compound metabolic process 9.09% (5/55) 1.72 0.017787 0.037736
GO:0005488 binding 27.27% (15/55) 0.82 0.017594 0.037839
GO:0042398 cellular modified amino acid biosynthetic process 1.82% (1/55) 5.75 0.01846 0.038135
GO:0005694 chromosome 1.82% (1/55) 5.75 0.01846 0.038135
GO:0043170 macromolecule metabolic process 16.36% (9/55) 1.11 0.02159 0.042906
GO:0006265 DNA topological change 1.82% (1/55) 5.53 0.021504 0.043284
GO:0003916 DNA topoisomerase activity 1.82% (1/55) 5.53 0.021504 0.043284
GO:0008150 biological_process 27.27% (15/55) 0.77 0.023481 0.046082
GO:0043167 ion binding 16.36% (9/55) 1.07 0.025665 0.049745
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_49 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_58 0.043 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_110 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_172 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_214 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_252 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_256 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_25 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_36 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_77 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_108 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_114 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_125 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_145 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_6 0.041 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_20 0.047 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_130 0.053 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_14 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_31 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_52 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_146 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_154 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_164 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_224 0.038 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_265 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_267 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_52 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_116 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_118 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_165 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (55) (download table)

InterPro Domains

GO Terms

Family Terms