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  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G54820

AT1G54820


Description : Protein kinase superfamily protein


Gene families : OG_01_0000017 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Expression Profile


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Co-expression Networks

Type Description Actions
Neighborhood HRR: AT1G54820
Cluster HCCA: Cluster_216

Expression Context Conservation (ECC)

Target Alias Description ECC score Gene Family Method Actions
AT1G20650 No alias Protein kinase superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G05940 No alias Protein kinase superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G28930 No alias protein kinase 1B 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g05970.1 No alias L-type lectin-domain containing receptor kinase S.4... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g06000.1 No alias L-type lectin-domain containing receptor kinase IV.3... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_06709.1 No alias protein kinase (PBL27/RLCK185) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Functional Annotation

  • GO
  • Predicted GO
  • InterPro
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function None Extended
MF GO:0003824 catalytic activity None Extended
CC GO:0005575 cellular_component None Extended
CC GO:0005886 plasma membrane ISM Interproscan
CC GO:0016020 membrane None Extended
MF GO:0016301 kinase activity ISS Interproscan
MF GO:0016740 transferase activity None Extended
MF GO:0016772 transferase activity, transferring phosphorus-containing groups None Extended
CC GO:0110165 cellular anatomical entity None Extended
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0005242 inward rectifier potassium channel activity IEP HCCA
MF GO:0005244 voltage-gated ion channel activity IEP HCCA
MF GO:0005249 voltage-gated potassium channel activity IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009531 secondary cell wall IEP HCCA
BP GO:0010026 trichome differentiation IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
MF GO:0015140 malate transmembrane transporter activity IEP HCCA
MF GO:0015276 ligand-gated ion channel activity IEP HCCA
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022843 voltage-gated cation channel activity IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
BP GO:0042391 regulation of membrane potential IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0045962 positive regulation of development, heterochronic IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0071423 malate transmembrane transport IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:0098656 anion transmembrane transport IEP HCCA
MF GO:0099094 ligand-gated cation channel activity IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 148 426
External Links
PLAZA 3.0 Dicots AT1G54820
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