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  5. Mp1g04850.1

Mp1g04850.1


Description : ribonuclease H1


Gene families : OG_01_0002234 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g04850.1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Pp3c2_25170V3.1 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006352 DNA-templated transcription, initiation IEP HCCA
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0097354 prenylation IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 165 286
IPR011320 RNase_H1_N 7 50
No external refs found!