1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp2g12870.1

Mp2g12870.1


Description : component RPL26 of LSU proteome component


Gene families : OG_01_0001058 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001058_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g12870.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT3G49910 No alias Translation protein SH3-like family protein 0.17 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G67510 No alias Translation protein SH3-like family protein 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre01.g040000 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.38 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_11120V3.1 No alias Translation protein SH3-like family protein 0.26 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_25170V3.1 No alias Translation protein SH3-like family protein 0.36 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_25000V3.1 No alias Translation protein SH3-like family protein 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_15910V3.1 No alias Translation protein SH3-like family protein 0.21 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_17780V3.1 No alias Translation protein SH3-like family protein 0.21 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03686.1 No alias component uL24 of LSU proteome component 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004427 inorganic diphosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005756 Ribosomal_L26/L24P_euk/arc 65 178
IPR005824 KOW 108 139
No external refs found!