AT1G65040


Description : RING/U-box superfamily protein


Gene families : OG_01_0002236 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002236_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G65040
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Mp1g18190.1 No alias ubiquitin ligase component HRD1 of ER-associated protein... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006457 protein folding RCA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0008295 spermidine biosynthetic process RCA Interproscan
BP GO:0009408 response to heat RCA Interproscan
BP GO:0009644 response to high light intensity RCA Interproscan
BP GO:0030433 ubiquitin-dependent ERAD pathway IMP Interproscan
BP GO:0034976 response to endoplasmic reticulum stress RCA Interproscan
BP GO:0042542 response to hydrogen peroxide RCA Interproscan
Type GO Term Name Evidence Source
CC GO:0000815 ESCRT III complex IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005945 6-phosphofructokinase complex IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007568 aging IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
MF GO:0008509 anion transmembrane transporter activity IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010260 animal organ senescence IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016036 cellular response to phosphate starvation IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019374 galactolipid metabolic process IEP HCCA
BP GO:0019375 galactolipid biosynthetic process IEP HCCA
MF GO:0019779 Atg8 activating enzyme activity IEP HCCA
CC GO:0030173 integral component of Golgi membrane IEP HCCA
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP HCCA
CC GO:0031228 intrinsic component of Golgi membrane IEP HCCA
CC GO:0031300 intrinsic component of organelle membrane IEP HCCA
CC GO:0031301 integral component of organelle membrane IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0080024 indolebutyric acid metabolic process IEP HCCA
BP GO:0080026 response to indolebutyric acid IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 112 151
PLAZA 3.0 Dicots AT1G65040