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  5. Mp7g08730.1

Mp7g08730.1


Description : component RPL8 of LSU proteome component


Gene families : OG_01_0000901 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000901_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g08730.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT2G18020 No alias Ribosomal protein L2 family 0.26 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G36130 No alias Ribosomal protein L2 family 0.26 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g535851 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.26 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_10200V3.1 No alias Ribosomal protein L2 family 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_21760V3.1 No alias Ribosomal protein L2 family 0.33 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_23630V3.1 No alias Ribosomal protein L2 family 0.23 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_12690V3.1 No alias Ribosomal protein L2 family 0.29 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_12720V3.1 No alias Ribosomal protein L2 family 0.29 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_05427.1 No alias component uL2 of LSU proteome component 0.19 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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GO:0004252
Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0048478 replication fork protection IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090329 regulation of DNA-dependent DNA replication IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022666 Rbsml_prot_L2_RNA-bd_dom 14 89
IPR022669 Ribosomal_L2_C 98 230
No external refs found!