AT1G73410

Description : myb domain protein 54

Gene families : OG_01_0000049 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G73410
Cluster	HCCA: Cluster_206

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G69560	No alias	myb domain protein 105	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_340V3.1	No alias	myb domain protein 105	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903338	regulation of cell wall organization or biogenesis	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000652	regulation of secondary cell wall biogenesis	IMP	Interproscan
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
BP	GO:0003008	system process	IEP	HCCA
BP	GO:0003013	circulatory system process	IEP	HCCA
BP	GO:0003018	vascular process in circulatory system	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	ion transport	IEP	HCCA
BP	GO:0006812	cation transport	IEP	HCCA
BP	GO:0006820	anion transport	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0006857	oligopeptide transport	IEP	HCCA
BP	GO:0006868	glutamine transport	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
MF	GO:0008146	sulfotransferase activity	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009712	catechol-containing compound metabolic process	IEP	HCCA
BP	GO:0009713	catechol-containing compound biosynthetic process	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009801	cinnamic acid ester metabolic process	IEP	HCCA
BP	GO:0009802	cinnamic acid ester biosynthetic process	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0010232	vascular transport	IEP	HCCA
BP	GO:0010233	phloem transport	IEP	HCCA
MF	GO:0010333	terpene synthase activity	IEP	HCCA
BP	GO:0010345	suberin biosynthetic process	IEP	HCCA
BP	GO:0010585	glutamine secretion	IEP	HCCA
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transport	IEP	HCCA
BP	GO:0015833	peptide transport	IEP	HCCA
BP	GO:0016098	monoterpenoid metabolic process	IEP	HCCA
BP	GO:0016099	monoterpenoid biosynthetic process	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016289	CoA hydrolase activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
MF	GO:0018685	alkane 1-monooxygenase activity	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
CC	GO:0031224	intrinsic component of membrane	IEP	HCCA
CC	GO:0031225	anchored component of membrane	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0032890	regulation of organic acid transport	IEP	HCCA
MF	GO:0034768	(E)-beta-ocimene synthase activity	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
BP	GO:0042761	very long-chain fatty acid biosynthetic process	IEP	HCCA
BP	GO:0042886	amide transport	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0047617	acyl-CoA hydrolase activity	IEP	HCCA
BP	GO:0048766	root hair initiation	IEP	HCCA
MF	GO:0050551	myrcene synthase activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051952	regulation of amine transport	IEP	HCCA
BP	GO:0051955	regulation of amino acid transport	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0080143	regulation of amino acid export	IEP	HCCA
BP	GO:0080184	response to phenylpropanoid	IEP	HCCA
BP	GO:0090408	phloem nitrate loading	IEP	HCCA
MF	GO:0090430	caffeoyl-CoA: alcohol caffeoyl transferase activity	IEP	HCCA
BP	GO:0090431	alkyl caffeate ester biosynthetic process	IEP	HCCA
BP	GO:0110126	phloem loading	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1903789	regulation of amino acid transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	58	101
IPR001005	SANT/Myb	6	51

External Links

PLAZA 3.0 Dicots	AT1G73410

AT1G73410

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation