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  5. Mp8g18830.1

Mp8g18830.1


Description : cell cycle interphase key regulator


Gene families : OG_01_0002528 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g18830.1
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AT3G12280 No alias retinoblastoma-related 1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g255450 No alias Cell cycle.interphase.G1 phase.RB key regulator 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_9580V3.1 No alias retinoblastoma-related 1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0051726 regulation of cell cycle IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
CC GO:0000124 SAGA complex IEP HCCA
CC GO:0000145 exocyst IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR024599 RB_N 164 294
IPR002719 RB_B 814 939
IPR015030 RB_C 986 1028
IPR002720 RB_A 483 680
No external refs found!