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  5. Pp3c12_14490V3.1

Pp3c12_14490V3.1


Description : cullin4


Gene families : OG_01_0002654 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002654_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_14490V3.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cre12.g516500 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g07340.1 No alias scaffold component CUL4 of CUL4-DDB1 ubiquitination... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03352.2 No alias scaffold component CUL4 of CUL4-DDB1 ubiquitination complexes 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!