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  5. AT1G78730

AT1G78730


Description : FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein


Gene families : OG_01_0000057 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G78730
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
AT1G66640 No alias RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G23955 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
BP GO:0000103 sulfate assimilation IEP HCCA
BP GO:0000338 protein deneddylation IEP HCCA
BP GO:0001934 positive regulation of protein phosphorylation IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004124 cysteine synthase activity IEP HCCA
MF GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity IEP HCCA
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004676 3-phosphoinositide-dependent protein kinase activity IEP HCCA
MF GO:0004686 elongation factor-2 kinase activity IEP HCCA
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP HCCA
MF GO:0004844 uracil DNA N-glycosylase activity IEP HCCA
CC GO:0005697 telomerase holoenzyme complex IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008106 alcohol dehydrogenase (NADP+) activity IEP HCCA
CC GO:0008180 COP9 signalosome IEP HCCA
MF GO:0008265 Mo-molybdopterin cofactor sulfurase activity IEP HCCA
MF GO:0008716 D-alanine-D-alanine ligase activity IEP HCCA
CC GO:0009330 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex IEP HCCA
BP GO:0010387 COP9 signalosome assembly IEP HCCA
MF GO:0010436 carotenoid dioxygenase activity IEP HCCA
BP GO:0010562 positive regulation of phosphorus metabolic process IEP HCCA
MF GO:0015562 efflux transmembrane transporter activity IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016783 sulfurtransferase activity IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0031401 positive regulation of protein modification process IEP HCCA
CC GO:0031501 mannosyltransferase complex IEP HCCA
BP GO:0032206 positive regulation of telomere maintenance IEP HCCA
BP GO:0032210 regulation of telomere maintenance via telomerase IEP HCCA
BP GO:0032212 positive regulation of telomere maintenance via telomerase IEP HCCA
CC GO:0033185 dolichol-phosphate-mannose synthase complex IEP HCCA
BP GO:0033674 positive regulation of kinase activity IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
BP GO:0042327 positive regulation of phosphorylation IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0043966 histone H3 acetylation IEP HCCA
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP HCCA
BP GO:0045860 positive regulation of protein kinase activity IEP HCCA
BP GO:0045937 positive regulation of phosphate metabolic process IEP HCCA
BP GO:0048232 male gamete generation IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0051054 positive regulation of DNA metabolic process IEP HCCA
BP GO:0051347 positive regulation of transferase activity IEP HCCA
BP GO:0060359 response to ammonium ion IEP HCCA
MF GO:0070300 phosphatidic acid binding IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
MF GO:0097506 deaminated base DNA N-glycosylase activity IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
BP GO:1904356 regulation of telomere maintenance via telomere lengthening IEP HCCA
BP GO:1904358 positive regulation of telomere maintenance via telomere lengthening IEP HCCA
BP GO:2000278 regulation of DNA biosynthetic process IEP HCCA
BP GO:2000573 positive regulation of DNA biosynthetic process IEP HCCA
BP GO:2001252 positive regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR006566 FBD 347 388
IPR001810 F-box_dom 25 61
IPR013101 Leu-rich_rpt_2 151 176
PLAZA 3.0 Dicots AT1G78730