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AT1G79540


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0000166 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G79540
Cluster HCCA: Cluster_228


Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
BP GO:0000103 sulfate assimilation IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004124 cysteine synthase activity IEP HCCA
MF GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity IEP HCCA
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004686 elongation factor-2 kinase activity IEP HCCA
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP HCCA
MF GO:0004844 uracil DNA N-glycosylase activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006268 DNA unwinding involved in DNA replication IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008106 alcohol dehydrogenase (NADP+) activity IEP HCCA
MF GO:0008265 Mo-molybdopterin cofactor sulfurase activity IEP HCCA
CC GO:0009330 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex IEP HCCA
MF GO:0009917 sterol 5-alpha reductase activity IEP HCCA
BP GO:0010268 brassinosteroid homeostasis IEP HCCA
MF GO:0010436 carotenoid dioxygenase activity IEP HCCA
MF GO:0015562 efflux transmembrane transporter activity IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016783 sulfurtransferase activity IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
CC GO:0031501 mannosyltransferase complex IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
CC GO:0033185 dolichol-phosphate-mannose synthase complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0043966 histone H3 acetylation IEP HCCA
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP HCCA
BP GO:0048232 male gamete generation IEP HCCA
MF GO:0050213 progesterone 5-alpha-reductase activity IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060359 response to ammonium ion IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
MF GO:0097506 deaminated base DNA N-glycosylase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 657 684
IPR002885 Pentatricopeptide_repeat 695 712
IPR002885 Pentatricopeptide_repeat 306 334
IPR002885 Pentatricopeptide_repeat 115 172
IPR002885 Pentatricopeptide_repeat 266 292
IPR002885 Pentatricopeptide_repeat 203 245
IPR002885 Pentatricopeptide_repeat 336 384
IPR002885 Pentatricopeptide_repeat 406 455
IPR002885 Pentatricopeptide_repeat 515 563
PLAZA 3.0 Dicots AT1G79540