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  5. Pp3c15_21880V3.1

Pp3c15_21880V3.1


Description : ADP-ribosylation factor 3


Gene families : OG_01_0005039 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c15_21880V3.1
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AT2G24765 No alias ADP-ribosylation factor 3 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g535900 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016485 protein processing IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!