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  5. Pp3c15_4370V3.1

Pp3c15_4370V3.1


Description : Zinc-binding ribosomal protein family protein


Gene families : OG_01_0000946 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c15_4370V3.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AT1G15250 No alias Zinc-binding ribosomal protein family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52300 No alias Zinc-binding ribosomal protein family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G16080 No alias Zinc-binding ribosomal protein family protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre10.g430400 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g12400.1 No alias component RPL37 of LSU proteome component 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_9910V3.1 No alias Zinc-binding ribosomal protein family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_01583.1 No alias component eL37 of LSU proteome component 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005742 mitochondrial outer membrane translocase complex IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
MF GO:0008324 cation transmembrane transporter activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015075 ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0022853 active ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098799 outer mitochondrial membrane protein complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001569 Ribosomal_L37e 2 53
No external refs found!