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  5. AT2G13610

AT2G13610


Description : ABC-2 type transporter family protein


Gene families : OG_01_0000376 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G13610
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
Pp3c18_7010V3.1 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_15560V3.1 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_15570V3.1 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_3590V3.1 No alias ABC-2 type transporter family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_34730V3.1 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0010103 stomatal complex morphogenesis RCA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
MF GO:0001872 (1->3)-beta-D-glucan binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006949 syncytium formation IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009786 regulation of asymmetric cell division IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009913 epidermal cell differentiation IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
CC GO:0009986 cell surface IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0010143 cutin biosynthetic process IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP HCCA
MF GO:0010385 double-stranded methylated DNA binding IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0018685 alkane 1-monooxygenase activity IEP HCCA
MF GO:0019199 transmembrane receptor protein kinase activity IEP HCCA
CC GO:0030139 endocytic vesicle IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0030422 production of siRNA involved in RNA interference IEP HCCA
BP GO:0030855 epithelial cell differentiation IEP HCCA
BP GO:0031050 dsRNA processing IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043966 histone H3 acetylation IEP HCCA
BP GO:0043971 histone H3-K18 acetylation IEP HCCA
BP GO:0043972 histone H3-K23 acetylation IEP HCCA
BP GO:0044030 regulation of DNA methylation IEP HCCA
BP GO:0044154 histone H3-K14 acetylation IEP HCCA
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP HCCA
BP GO:0045596 negative regulation of cell differentiation IEP HCCA
CC GO:0046658 anchored component of plasma membrane IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048497 maintenance of floral organ identity IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090700 maintenance of plant organ identity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:0140458 pre-transcriptional gene silencing by RNA IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 63 211
IPR013525 ABC_2_trans 373 581
PLAZA 3.0 Dicots AT2G13610