Coexpression cluster: Cluster_264 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016246 RNA interference 10.87% (5/46) 5.47 0.0 8e-06
GO:0007166 cell surface receptor signaling pathway 13.04% (6/46) 4.75 0.0 1e-05
GO:0006468 protein phosphorylation 19.57% (9/46) 3.49 0.0 1.2e-05
GO:0035194 post-transcriptional gene silencing by RNA 10.87% (5/46) 5.27 0.0 1.3e-05
GO:0031047 gene silencing by RNA 13.04% (6/46) 4.49 0.0 1.6e-05
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway 13.04% (6/46) 4.79 0.0 1.6e-05
GO:0007167 enzyme linked receptor protein signaling pathway 13.04% (6/46) 4.79 0.0 1.6e-05
GO:0016310 phosphorylation 19.57% (9/46) 2.98 2e-06 8.5e-05
GO:0006346 DNA methylation-dependent heterochromatin assembly 10.87% (5/46) 4.58 2e-06 9.8e-05
GO:0050789 regulation of biological process 45.65% (21/46) 1.45 4e-06 0.000185
GO:0016441 posttranscriptional gene silencing 10.87% (5/46) 4.29 6e-06 0.000214
GO:0070828 heterochromatin organization 10.87% (5/46) 4.11 1e-05 0.000305
GO:0045814 negative regulation of gene expression, epigenetic 10.87% (5/46) 4.09 1.1e-05 0.000309
GO:0031507 heterochromatin assembly 10.87% (5/46) 4.12 1e-05 0.000319
GO:0010075 regulation of meristem growth 10.87% (5/46) 4.14 1e-05 0.000327
GO:0004672 protein kinase activity 15.22% (7/46) 2.99 2.6e-05 0.000527
GO:0040029 regulation of gene expression, epigenetic 10.87% (5/46) 3.9 2.1e-05 0.000535
GO:0005886 plasma membrane 34.78% (16/46) 1.61 2.7e-05 0.00054
GO:0065007 biological regulation 45.65% (21/46) 1.29 2.5e-05 0.000551
GO:0007165 signal transduction 23.91% (11/46) 2.15 2.4e-05 0.000556
GO:0004674 protein serine/threonine kinase activity 13.04% (6/46) 3.37 2.3e-05 0.000565
GO:0010608 posttranscriptional regulation of gene expression 10.87% (5/46) 3.73 3.7e-05 0.000696
GO:0010629 negative regulation of gene expression 13.04% (6/46) 3.19 4.7e-05 0.000835
GO:0031225 anchored component of membrane 10.87% (5/46) 3.6 5.7e-05 0.000971
GO:0006325 chromatin organization 10.87% (5/46) 3.53 7.1e-05 0.001165
GO:0016773 phosphotransferase activity, alcohol group as acceptor 15.22% (7/46) 2.71 8.7e-05 0.001242
GO:0048449 floral organ formation 8.7% (4/46) 4.1 8.7e-05 0.001281
GO:0030554 adenyl nucleotide binding 13.04% (6/46) 2.99 0.000101 0.001294
GO:0032559 adenyl ribonucleotide binding 13.04% (6/46) 2.99 0.000101 0.001294
GO:0048638 regulation of developmental growth 10.87% (5/46) 3.44 9.5e-05 0.001308
GO:0009505 plant-type cell wall 10.87% (5/46) 3.48 8.3e-05 0.001315
GO:0005524 ATP binding 13.04% (6/46) 3.03 8.7e-05 0.001324
GO:0043168 anion binding 15.22% (7/46) 2.66 0.000109 0.001357
GO:0090698 post-embryonic plant morphogenesis 10.87% (5/46) 3.33 0.000136 0.001651
GO:0006464 cellular protein modification process 21.74% (10/46) 2.0 0.000144 0.001652
GO:0036211 protein modification process 21.74% (10/46) 2.0 0.000144 0.001652
GO:0040008 regulation of growth 10.87% (5/46) 3.3 0.000149 0.001664
GO:0043412 macromolecule modification 23.91% (11/46) 1.84 0.000169 0.00183
GO:0003006 developmental process involved in reproduction 23.91% (11/46) 1.83 0.000188 0.001989
GO:0048451 petal formation 6.52% (3/46) 4.65 0.000237 0.002382
GO:0048453 sepal formation 6.52% (3/46) 4.65 0.000237 0.002382
GO:0007389 pattern specification process 10.87% (5/46) 3.15 0.000244 0.002392
GO:0000911 cytokinesis by cell plate formation 8.7% (4/46) 3.68 0.000265 0.002535
GO:0000910 cytokinesis 8.7% (4/46) 3.65 0.000287 0.002685
GO:1905393 plant organ formation 8.7% (4/46) 3.63 0.000304 0.002786
GO:0032502 developmental process 32.61% (15/46) 1.38 0.00033 0.002955
GO:0005618 cell wall 13.04% (6/46) 2.64 0.000374 0.003278
GO:0030312 external encapsulating structure 13.04% (6/46) 2.62 0.000406 0.003484
GO:0035639 purine ribonucleoside triphosphate binding 13.04% (6/46) 2.6 0.000444 0.003732
GO:0017076 purine nucleotide binding 13.04% (6/46) 2.56 0.000497 0.004017
GO:0032553 ribonucleotide binding 13.04% (6/46) 2.55 0.000519 0.004035
GO:0010605 negative regulation of macromolecule metabolic process 13.04% (6/46) 2.56 0.00051 0.004043
GO:0032555 purine ribonucleotide binding 13.04% (6/46) 2.57 0.000493 0.004062
GO:0097367 carbohydrate derivative binding 13.04% (6/46) 2.53 0.000565 0.004311
GO:0010051 xylem and phloem pattern formation 6.52% (3/46) 4.17 0.000622 0.00466
GO:0009892 negative regulation of metabolic process 13.04% (6/46) 2.49 0.00065 0.004784
GO:0031224 intrinsic component of membrane 10.87% (5/46) 2.76 0.000832 0.006011
GO:0022414 reproductive process 23.91% (11/46) 1.57 0.000869 0.006175
GO:0044267 cellular protein metabolic process 21.74% (10/46) 1.66 0.000939 0.006446
GO:0031048 heterochromatin assembly by small RNA 6.52% (3/46) 3.97 0.000933 0.006518
GO:0016301 kinase activity 17.39% (8/46) 1.93 0.001011 0.006831
GO:0009855 determination of bilateral symmetry 6.52% (3/46) 3.89 0.001107 0.007357
GO:0009799 specification of symmetry 6.52% (3/46) 3.87 0.001133 0.007413
GO:0050794 regulation of cellular process 32.61% (15/46) 1.19 0.00128 0.008237
GO:1901529 positive regulation of anion channel activity 2.17% (1/46) 9.23 0.001663 0.008675
GO:1903961 positive regulation of anion transmembrane transport 2.17% (1/46) 9.23 0.001663 0.008675
GO:1903793 positive regulation of anion transport 2.17% (1/46) 9.23 0.001663 0.008675
GO:1901528 hydrogen peroxide mediated signaling pathway involved in stomatal movement 2.17% (1/46) 9.23 0.001663 0.008675
GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement 2.17% (1/46) 9.23 0.001663 0.008675
GO:0034764 positive regulation of transmembrane transport 2.17% (1/46) 9.23 0.001663 0.008675
GO:0032414 positive regulation of ion transmembrane transporter activity 2.17% (1/46) 9.23 0.001663 0.008675
GO:0032411 positive regulation of transporter activity 2.17% (1/46) 9.23 0.001663 0.008675
GO:0034767 positive regulation of ion transmembrane transport 2.17% (1/46) 9.23 0.001663 0.008675
GO:0006796 phosphate-containing compound metabolic process 19.57% (9/46) 1.71 0.001405 0.008904
GO:0005576 extracellular region 26.09% (12/46) 1.38 0.001562 0.009607
GO:0006793 phosphorus metabolic process 19.57% (9/46) 1.69 0.00154 0.009614
GO:0090626 plant epidermis morphogenesis 6.52% (3/46) 3.69 0.001644 0.009674
GO:0010103 stomatal complex morphogenesis 6.52% (3/46) 3.69 0.001644 0.009674
GO:0048646 anatomical structure formation involved in morphogenesis 8.7% (4/46) 2.98 0.001624 0.009842
GO:0036094 small molecule binding 15.22% (7/46) 1.93 0.002196 0.011311
GO:0016772 transferase activity, transferring phosphorus-containing groups 17.39% (8/46) 1.74 0.002318 0.011791
GO:0009653 anatomical structure morphogenesis 15.22% (7/46) 1.9 0.002417 0.012146
GO:0000166 nucleotide binding 13.04% (6/46) 2.1 0.002626 0.01288
GO:1901265 nucleoside phosphate binding 13.04% (6/46) 2.1 0.002626 0.01288
GO:0016570 histone modification 8.7% (4/46) 2.78 0.002735 0.013102
GO:0016020 membrane 34.78% (16/46) 1.03 0.002721 0.013187
GO:0019538 protein metabolic process 23.91% (11/46) 1.35 0.003005 0.014068
GO:0140096 catalytic activity, acting on a protein 17.39% (8/46) 1.68 0.002987 0.014144
GO:0050793 regulation of developmental process 13.04% (6/46) 2.05 0.003087 0.014289
GO:0071588 hydrogen peroxide mediated signaling pathway 2.17% (1/46) 8.23 0.003324 0.014886
GO:0051567 histone H3-K9 methylation 6.52% (3/46) 3.33 0.003299 0.014938
GO:0061647 histone H3-K9 modification 6.52% (3/46) 3.33 0.003299 0.014938
GO:0003779 actin binding 4.35% (2/46) 4.48 0.003666 0.01624
GO:0003002 regionalization 6.52% (3/46) 3.27 0.00373 0.016348
GO:0016572 histone phosphorylation 4.35% (2/46) 4.28 0.004804 0.020615
GO:0048653 anther development 4.35% (2/46) 4.28 0.004804 0.020615
GO:0043270 positive regulation of ion transport 2.17% (1/46) 7.65 0.004982 0.02116
GO:0048439 flower morphogenesis 4.35% (2/46) 4.14 0.00575 0.02393
GO:0046658 anchored component of plasma membrane 4.35% (2/46) 4.14 0.00575 0.02393
GO:0010073 meristem maintenance 4.35% (2/46) 4.12 0.005916 0.024372
GO:0005504 fatty acid binding 2.17% (1/46) 7.23 0.006637 0.027075
GO:0034968 histone lysine methylation 6.52% (3/46) 2.96 0.006703 0.027076
GO:0018022 peptidyl-lysine methylation 6.52% (3/46) 2.96 0.006783 0.027134
GO:0010016 shoot system morphogenesis 4.35% (2/46) 3.89 0.008067 0.031959
GO:0001872 (1->3)-beta-D-glucan binding 2.17% (1/46) 6.91 0.00829 0.03222
GO:0051050 positive regulation of transport 2.17% (1/46) 6.91 0.00829 0.03222
GO:0010468 regulation of gene expression 19.57% (9/46) 1.31 0.009072 0.034931
GO:0032259 methylation 8.7% (4/46) 2.25 0.009788 0.036997
GO:0043414 macromolecule methylation 8.7% (4/46) 2.25 0.009788 0.036997
GO:0048443 stamen development 4.35% (2/46) 3.74 0.009878 0.036998
GO:0005911 cell-cell junction 10.87% (5/46) 1.82 0.013308 0.043863
GO:0030054 cell junction 10.87% (5/46) 1.82 0.013308 0.043863
GO:0070161 anchoring junction 10.87% (5/46) 1.82 0.013308 0.043863
GO:0016571 histone methylation 6.52% (3/46) 2.66 0.01186 0.044019
GO:0006479 protein methylation 6.52% (3/46) 2.65 0.012197 0.044471
GO:0008213 protein alkylation 6.52% (3/46) 2.65 0.012197 0.044471
GO:0052126 movement in host environment 2.17% (1/46) 6.23 0.013231 0.044683
GO:0046739 transport of virus in multicellular host 2.17% (1/46) 6.23 0.013231 0.044683
GO:0044000 movement in host 2.17% (1/46) 6.23 0.013231 0.044683
GO:0048519 negative regulation of biological process 13.04% (6/46) 1.63 0.012397 0.044802
GO:0008092 cytoskeletal protein binding 4.35% (2/46) 3.49 0.013739 0.044926
GO:0009813 flavonoid biosynthetic process 4.35% (2/46) 3.55 0.01278 0.045004
GO:0009887 animal organ morphogenesis 4.35% (2/46) 3.55 0.01278 0.045004
GO:0022402 cell cycle process 8.7% (4/46) 2.14 0.012589 0.045101
GO:0031226 intrinsic component of plasma membrane 4.35% (2/46) 3.48 0.013984 0.045366
GO:0010224 response to UV-B 4.35% (2/46) 3.53 0.013017 0.04545
GO:0009506 plasmodesma 10.87% (5/46) 1.82 0.013185 0.045648
GO:0009812 flavonoid metabolic process 4.35% (2/46) 3.42 0.014981 0.046759
GO:0046794 transport of virus 2.17% (1/46) 6.06 0.014873 0.046776
GO:0044766 multi-organism transport 2.17% (1/46) 6.06 0.014873 0.046776
GO:0010497 plasmodesmata-mediated intercellular transport 2.17% (1/46) 6.06 0.014873 0.046776
GO:1902579 multi-organism localization 2.17% (1/46) 6.06 0.014873 0.046776
GO:0009664 plant-type cell wall organization 6.52% (3/46) 2.5 0.016012 0.048865
GO:0060255 regulation of macromolecule metabolic process 19.57% (9/46) 1.17 0.015932 0.048986
GO:0016043 cellular component organization 19.57% (9/46) 1.17 0.015853 0.049107
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_2 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_5 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_7 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_12 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_18 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_19 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_30 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_31 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_50 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_55 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_71 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_93 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_94 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_95 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_104 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_112 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_115 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_116 0.038 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_128 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_155 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_166 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_167 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_181 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_187 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_188 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_190 0.044 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_196 0.033 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_210 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_223 0.033 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_228 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_235 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_255 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_29 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_39 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_52 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_65 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_101 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_106 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_129 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_136 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_140 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_4 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_86 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_87 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_124 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_130 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_147 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_168 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_169 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_199 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_201 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_249 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_255 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_276 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_282 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_321 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_31 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_148 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (46) (download table)

InterPro Domains

GO Terms

Family Terms