1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c20_2550V3.1

Pp3c20_2550V3.1


Description : Zinc-binding ribosomal protein family protein


Gene families : OG_01_0000946 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000946_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_2550V3.1
Cluster HCCA: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AT1G52300 No alias Zinc-binding ribosomal protein family protein 0.4 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G16080 No alias Zinc-binding ribosomal protein family protein 0.34 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre10.g430400 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.36 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g12400.1 No alias component RPL37 of LSU proteome component 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_9910V3.1 No alias Zinc-binding ribosomal protein family protein 0.23 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_01583.1 No alias component eL37 of LSU proteome component 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001569 Ribosomal_L37e 2 53
No external refs found!