AT2G18060

Description : vascular related NAC-domain protein 1

Gene families : OG_01_0000899 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000899_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G18060
Cluster	HCCA: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT2G46770	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62380	No alias	NAC-domain protein 101	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009741	response to brassinosteroid	RCA	Interproscan
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010087	phloem or xylem histogenesis	None	Extended
BP	GO:0010089	xylem development	RCA	Interproscan
BP	GO:0010200	response to chitin	IEP	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0001666	response to hypoxia	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003747	translation release factor activity	IEP	HCCA
MF	GO:0003977	UDP-N-acetylglucosamine diphosphorylase activity	IEP	HCCA
MF	GO:0003983	UTP:glucose-1-phosphate uridylyltransferase activity	IEP	HCCA
MF	GO:0004022	alcohol dehydrogenase (NAD+) activity	IEP	HCCA
MF	GO:0004707	MAP kinase activity	IEP	HCCA
BP	GO:0006011	UDP-glucose metabolic process	IEP	HCCA
BP	GO:0006040	amino sugar metabolic process	IEP	HCCA
BP	GO:0006047	UDP-N-acetylglucosamine metabolic process	IEP	HCCA
BP	GO:0006415	translational termination	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
MF	GO:0008079	translation termination factor activity	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
BP	GO:0009641	shade avoidance	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	HCCA
BP	GO:0009823	cytokinin catabolic process	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009887	animal organ morphogenesis	IEP	HCCA
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010065	primary meristem tissue development	IEP	HCCA
BP	GO:0010067	procambium histogenesis	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
BP	GO:0010218	response to far red light	IEP	HCCA
BP	GO:0010252	auxin homeostasis	IEP	HCCA
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEP	HCCA
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	HCCA
MF	GO:0010487	thermospermine synthase activity	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	HCCA
MF	GO:0016768	spermine synthase activity	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
MF	GO:0018455	alcohol dehydrogenase [NAD(P)+] activity	IEP	HCCA
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	HCCA
BP	GO:0019276	UDP-N-acetylgalactosamine metabolic process	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0022411	cellular component disassembly	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032984	protein-containing complex disassembly	IEP	HCCA
BP	GO:0036293	response to decreased oxygen levels	IEP	HCCA
BP	GO:0042447	hormone catabolic process	IEP	HCCA
BP	GO:0043624	cellular protein complex disassembly	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0045597	positive regulation of cell differentiation	IEP	HCCA
BP	GO:0048468	cell development	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048479	style development	IEP	HCCA
BP	GO:0048480	stigma development	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048508	embryonic meristem development	IEP	HCCA
BP	GO:0048589	developmental growth	IEP	HCCA
BP	GO:0048759	xylem vessel member cell differentiation	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
MF	GO:0051748	UTP-monosaccharide-1-phosphate uridylyltransferase activity	IEP	HCCA
MF	GO:0051749	indole acetic acid carboxyl methyltransferase activity	IEP	HCCA
MF	GO:0052630	UDP-N-acetylgalactosamine diphosphorylase activity	IEP	HCCA
BP	GO:0065001	specification of axis polarity	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA
BP	GO:0070482	response to oxygen levels	IEP	HCCA
MF	GO:0070569	uridylyltransferase activity	IEP	HCCA
BP	GO:0071248	cellular response to metal ion	IEP	HCCA
BP	GO:0071281	cellular response to iron ion	IEP	HCCA
BP	GO:0071396	cellular response to lipid	IEP	HCCA
BP	GO:0071398	cellular response to fatty acid	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0071731	response to nitric oxide	IEP	HCCA
BP	GO:0071732	cellular response to nitric oxide	IEP	HCCA
BP	GO:0080147	root hair cell development	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:1901699	cellular response to nitrogen compound	IEP	HCCA
BP	GO:1902170	cellular response to reactive nitrogen species	IEP	HCCA
BP	GO:1905177	tracheary element differentiation	IEP	HCCA
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	10	137

External Links

PLAZA 3.0 Dicots	AT2G18060

AT2G18060

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation