Coexpression cluster: Cluster_35 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0015979 photosynthesis 4.96% (7/141) 4.63 0.0 2e-06
GO:0005622 intracellular anatomical structure 2.13% (3/141) 6.69 1e-06 7e-05
GO:0009579 thylakoid 2.13% (3/141) 6.69 1e-06 7e-05
GO:0006952 defense response 2.84% (4/141) 4.46 3e-05 0.001054
GO:0009521 photosystem 2.84% (4/141) 4.02 0.000104 0.00294
GO:0005840 ribosome 4.96% (7/141) 2.64 0.000139 0.003273
GO:0009055 electron transfer activity 3.55% (5/141) 3.02 0.000387 0.004957
GO:0043232 intracellular non-membrane-bounded organelle 4.96% (7/141) 2.4 0.000385 0.005423
GO:0043228 non-membrane-bounded organelle 4.96% (7/141) 2.4 0.000385 0.005423
GO:0004129 cytochrome-c oxidase activity 1.42% (2/141) 6.11 0.000311 0.005482
GO:0016675 oxidoreductase activity, acting on a heme group of donors 1.42% (2/141) 6.11 0.000311 0.005482
GO:0009523 photosystem II 2.13% (3/141) 4.17 0.000596 0.007008
GO:0110165 cellular anatomical entity 14.18% (20/141) 1.14 0.000722 0.00783
GO:0003735 structural constituent of ribosome 4.26% (6/141) 2.39 0.001047 0.009846
GO:0043043 peptide biosynthetic process 4.26% (6/141) 2.37 0.001118 0.009849
GO:0006412 translation 4.26% (6/141) 2.41 0.000981 0.009876
GO:0043604 amide biosynthetic process 4.26% (6/141) 2.35 0.001191 0.009882
GO:0006518 peptide metabolic process 4.26% (6/141) 2.33 0.001269 0.00994
GO:0043603 cellular amide metabolic process 4.26% (6/141) 2.3 0.001435 0.010652
GO:0006397 mRNA processing 2.13% (3/141) 3.69 0.001593 0.011227
GO:0005198 structural molecule activity 4.26% (6/141) 2.22 0.001871 0.011989
GO:0015453 oxidoreduction-driven active transmembrane transporter activity 1.42% (2/141) 4.94 0.001822 0.012235
GO:0016071 mRNA metabolic process 2.13% (3/141) 3.48 0.00243 0.014895
GO:0016984 ribulose-bisphosphate carboxylase activity 0.71% (1/141) 7.11 0.00726 0.031021
GO:0019684 photosynthesis, light reaction 0.71% (1/141) 7.11 0.00726 0.031021
GO:0016168 chlorophyll binding 0.71% (1/141) 7.11 0.00726 0.031021
GO:0031361 integral component of thylakoid membrane 0.71% (1/141) 7.11 0.00726 0.031021
GO:0031360 intrinsic component of thylakoid membrane 0.71% (1/141) 7.11 0.00726 0.031021
GO:0016021 integral component of membrane 5.67% (8/141) 1.57 0.005681 0.033377
GO:0031224 intrinsic component of membrane 5.67% (8/141) 1.56 0.00605 0.03412
GO:0043226 organelle 4.96% (7/141) 1.67 0.006838 0.035707
GO:0043229 intracellular organelle 4.96% (7/141) 1.67 0.00672 0.036442
GO:0005575 cellular_component 14.18% (20/141) 0.85 0.007239 0.036455
GO:0098796 membrane protein complex 2.84% (4/141) 2.25 0.010187 0.042246
GO:0034645 cellular macromolecule biosynthetic process 4.26% (6/141) 1.7 0.010878 0.043822
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_2 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_61 0.052 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_93 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_107 0.076 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_38 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_8 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_19 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_21 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_27 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_31 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_34 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_37 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_39 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_46 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_48 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_49 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_50 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_53 0.043 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_65 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_70 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_76 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_90 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_92 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_97 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_106 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_114 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_115 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_116 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_123 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_124 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_126 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_131 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_134 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_145 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_147 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_156 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_157 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_176 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_213 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_3 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_12 0.042 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_75 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_158 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_173 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_236 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_276 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_114 0.041 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (141) (download table)

InterPro Domains

GO Terms

Family Terms