Coexpression cluster: Cluster_37 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0072522 purine-containing compound biosynthetic process 7.89% (6/76) 5.87 0.0 0.0
GO:0072521 purine-containing compound metabolic process 7.89% (6/76) 5.03 0.0 3e-06
GO:0009161 ribonucleoside monophosphate metabolic process 3.95% (3/76) 7.13 1e-06 1.5e-05
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 3.95% (3/76) 7.13 1e-06 1.5e-05
GO:0009156 ribonucleoside monophosphate biosynthetic process 3.95% (3/76) 7.13 1e-06 1.5e-05
GO:0009127 purine nucleoside monophosphate biosynthetic process 3.95% (3/76) 7.13 1e-06 1.5e-05
GO:0009126 purine nucleoside monophosphate metabolic process 3.95% (3/76) 7.13 1e-06 1.5e-05
GO:0009124 nucleoside monophosphate biosynthetic process 3.95% (3/76) 7.13 1e-06 1.5e-05
GO:0009167 purine ribonucleoside monophosphate metabolic process 3.95% (3/76) 7.13 1e-06 1.5e-05
GO:0009123 nucleoside monophosphate metabolic process 3.95% (3/76) 7.13 1e-06 1.5e-05
GO:0055086 nucleobase-containing small molecule metabolic process 10.53% (8/76) 3.38 1e-06 1.7e-05
GO:0006164 purine nucleotide biosynthetic process 5.26% (4/76) 5.47 2e-06 2.9e-05
GO:0009058 biosynthetic process 17.11% (13/76) 2.5 0.0 3.1e-05
GO:1901135 carbohydrate derivative metabolic process 7.89% (6/76) 4.28 1e-06 3.7e-05
GO:0044281 small molecule metabolic process 11.84% (9/76) 2.78 6e-06 9.6e-05
GO:1901137 carbohydrate derivative biosynthetic process 5.26% (4/76) 4.87 1e-05 0.000148
GO:0009116 nucleoside metabolic process 3.95% (3/76) 5.99 1.2e-05 0.000157
GO:1901657 glycosyl compound metabolic process 3.95% (3/76) 5.99 1.2e-05 0.000157
GO:0006163 purine nucleotide metabolic process 5.26% (4/76) 4.54 2.5e-05 0.000309
GO:1901566 organonitrogen compound biosynthetic process 9.21% (7/76) 2.86 5e-05 0.00058
GO:0009260 ribonucleotide biosynthetic process 3.95% (3/76) 5.2 7e-05 0.000674
GO:0046390 ribose phosphate biosynthetic process 3.95% (3/76) 5.2 7e-05 0.000674
GO:0009152 purine ribonucleotide biosynthetic process 3.95% (3/76) 5.2 7e-05 0.000674
GO:0018130 heterocycle biosynthetic process 9.21% (7/76) 2.8 6.6e-05 0.000727
GO:0008152 metabolic process 27.63% (21/76) 1.27 8.8e-05 0.000787
GO:1901362 organic cyclic compound biosynthetic process 9.21% (7/76) 2.73 8.8e-05 0.000814
GO:0006814 sodium ion transport 2.63% (2/76) 6.87 0.000108 0.000865
GO:0006188 IMP biosynthetic process 2.63% (2/76) 6.87 0.000108 0.000865
GO:0046040 IMP metabolic process 2.63% (2/76) 6.87 0.000108 0.000865
GO:0003824 catalytic activity 31.58% (24/76) 1.11 0.000131 0.00101
GO:0019637 organophosphate metabolic process 7.89% (6/76) 2.79 0.000228 0.001707
GO:0016742 hydroxymethyl-, formyl- and related transferase activity 2.63% (2/76) 6.28 0.000269 0.001948
GO:0019438 aromatic compound biosynthetic process 7.89% (6/76) 2.62 0.000436 0.003063
GO:0046483 heterocycle metabolic process 11.84% (9/76) 1.97 0.000456 0.003111
GO:0009259 ribonucleotide metabolic process 3.95% (3/76) 4.2 0.000572 0.003404
GO:0019693 ribose phosphate metabolic process 3.95% (3/76) 4.2 0.000572 0.003404
GO:0009150 purine ribonucleotide metabolic process 3.95% (3/76) 4.2 0.000572 0.003404
GO:1901360 organic cyclic compound metabolic process 11.84% (9/76) 1.94 0.000542 0.003594
GO:0008150 biological_process 31.58% (24/76) 0.98 0.000559 0.003601
GO:0009117 nucleotide metabolic process 6.58% (5/76) 2.85 0.000654 0.003793
GO:0006753 nucleoside phosphate metabolic process 6.58% (5/76) 2.82 0.00071 0.00402
GO:0090407 organophosphate biosynthetic process 6.58% (5/76) 2.79 0.000791 0.004372
GO:0044271 cellular nitrogen compound biosynthetic process 9.21% (7/76) 2.19 0.000851 0.004591
GO:0044249 cellular biosynthetic process 10.53% (8/76) 1.99 0.000903 0.004759
GO:1901576 organic substance biosynthetic process 10.53% (8/76) 1.93 0.001179 0.005945
GO:0006139 nucleobase-containing compound metabolic process 10.53% (8/76) 1.93 0.001179 0.005945
GO:0034654 nucleobase-containing compound biosynthetic process 6.58% (5/76) 2.59 0.001464 0.007225
GO:0006725 cellular aromatic compound metabolic process 10.53% (8/76) 1.81 0.001955 0.009072
GO:0003674 molecular_function 43.42% (33/76) 0.67 0.00188 0.009085
GO:0034641 cellular nitrogen compound metabolic process 11.84% (9/76) 1.68 0.001931 0.009144
GO:0046129 purine ribonucleoside biosynthetic process 1.32% (1/76) 7.87 0.004284 0.013077
GO:0050483 IMP 5'-nucleotidase activity 1.32% (1/76) 7.87 0.004284 0.013077
GO:0015930 glutamate synthase activity 1.32% (1/76) 7.87 0.004284 0.013077
GO:1901659 glycosyl compound biosynthetic process 1.32% (1/76) 7.87 0.004284 0.013077
GO:0006177 GMP biosynthetic process 1.32% (1/76) 7.87 0.004284 0.013077
GO:0003937 IMP cyclohydrolase activity 1.32% (1/76) 7.87 0.004284 0.013077
GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity 1.32% (1/76) 7.87 0.004284 0.013077
GO:0003922 GMP synthase (glutamine-hydrolyzing) activity 1.32% (1/76) 7.87 0.004284 0.013077
GO:0046128 purine ribonucleoside metabolic process 1.32% (1/76) 7.87 0.004284 0.013077
GO:0046103 inosine biosynthetic process 1.32% (1/76) 7.87 0.004284 0.013077
GO:0004807 triose-phosphate isomerase activity 1.32% (1/76) 7.87 0.004284 0.013077
GO:0006166 purine ribonucleoside salvage 1.32% (1/76) 7.87 0.004284 0.013077
GO:0006190 inosine salvage 1.32% (1/76) 7.87 0.004284 0.013077
GO:0009163 nucleoside biosynthetic process 1.32% (1/76) 7.87 0.004284 0.013077
GO:0034404 nucleobase-containing small molecule biosynthetic process 1.32% (1/76) 7.87 0.004284 0.013077
GO:0042278 purine nucleoside metabolic process 1.32% (1/76) 7.87 0.004284 0.013077
GO:0042451 purine nucleoside biosynthetic process 1.32% (1/76) 7.87 0.004284 0.013077
GO:0042455 ribonucleoside biosynthetic process 1.32% (1/76) 7.87 0.004284 0.013077
GO:0043094 cellular metabolic compound salvage 1.32% (1/76) 7.87 0.004284 0.013077
GO:0043101 purine-containing compound salvage 1.32% (1/76) 7.87 0.004284 0.013077
GO:0043174 nucleoside salvage 1.32% (1/76) 7.87 0.004284 0.013077
GO:0046102 inosine metabolic process 1.32% (1/76) 7.87 0.004284 0.013077
GO:0046037 GMP metabolic process 1.32% (1/76) 7.87 0.004284 0.013077
GO:1901293 nucleoside phosphate biosynthetic process 5.26% (4/76) 2.75 0.002993 0.013353
GO:0009165 nucleotide biosynthetic process 5.26% (4/76) 2.75 0.002993 0.013353
GO:0016879 ligase activity, forming carbon-nitrogen bonds 2.63% (2/76) 4.54 0.003273 0.014328
GO:0006812 cation transport 3.95% (3/76) 3.08 0.00543 0.016359
GO:0009119 ribonucleoside metabolic process 1.32% (1/76) 6.87 0.00855 0.022287
GO:0008531 riboflavin kinase activity 1.32% (1/76) 6.87 0.00855 0.022287
GO:0006144 purine nucleobase metabolic process 1.32% (1/76) 6.87 0.00855 0.022287
GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity 1.32% (1/76) 6.87 0.00855 0.022287
GO:0019238 cyclohydrolase activity 1.32% (1/76) 6.87 0.00855 0.022287
GO:0004637 phosphoribosylamine-glycine ligase activity 1.32% (1/76) 6.87 0.00855 0.022287
GO:0009113 purine nucleobase biosynthetic process 1.32% (1/76) 6.87 0.00855 0.022287
GO:0006189 'de novo' IMP biosynthetic process 1.32% (1/76) 6.87 0.00855 0.022287
GO:0008253 5'-nucleotidase activity 1.32% (1/76) 6.87 0.00855 0.022287
GO:0008252 nucleotidase activity 1.32% (1/76) 6.87 0.00855 0.022287
GO:0030170 pyridoxal phosphate binding 2.63% (2/76) 3.87 0.008266 0.024275
GO:0070279 vitamin B6 binding 2.63% (2/76) 3.87 0.008266 0.024275
GO:0016491 oxidoreductase activity 7.89% (6/76) 1.72 0.009736 0.025096
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 2.63% (2/76) 3.66 0.010947 0.02791
GO:0071704 organic substance metabolic process 19.74% (15/76) 0.91 0.011738 0.029601
GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity 1.32% (1/76) 6.28 0.012797 0.02969
GO:0008964 phosphoenolpyruvate carboxylase activity 1.32% (1/76) 6.28 0.012797 0.02969
GO:0015977 carbon fixation 1.32% (1/76) 6.28 0.012797 0.02969
GO:0016842 amidine-lyase activity 1.32% (1/76) 6.28 0.012797 0.02969
GO:0009112 nucleobase metabolic process 1.32% (1/76) 6.28 0.012797 0.02969
GO:0046112 nucleobase biosynthetic process 1.32% (1/76) 6.28 0.012797 0.02969
GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity 1.32% (1/76) 6.28 0.012797 0.02969
GO:0019842 vitamin binding 2.63% (2/76) 3.58 0.012113 0.030218
GO:0016798 hydrolase activity, acting on glycosyl bonds 2.63% (2/76) 3.51 0.013331 0.030622
GO:0010277 chlorophyllide a oxygenase [overall] activity 1.32% (1/76) 5.87 0.017027 0.035588
GO:0004565 beta-galactosidase activity 1.32% (1/76) 5.87 0.017027 0.035588
GO:0009341 beta-galactosidase complex 1.32% (1/76) 5.87 0.017027 0.035588
GO:0015925 galactosidase activity 1.32% (1/76) 5.87 0.017027 0.035588
GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) 1.32% (1/76) 5.87 0.017027 0.035588
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.32% (1/76) 5.87 0.017027 0.035588
GO:0006099 tricarboxylic acid cycle 1.32% (1/76) 5.87 0.017027 0.035588
GO:0016840 carbon-nitrogen lyase activity 1.32% (1/76) 5.87 0.017027 0.035588
GO:0004611 phosphoenolpyruvate carboxykinase activity 1.32% (1/76) 5.87 0.017027 0.035588
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.32% (1/76) 5.87 0.017027 0.035588
GO:0016787 hydrolase activity 9.21% (7/76) 1.37 0.018463 0.038244
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 1.32% (1/76) 5.54 0.021239 0.041758
GO:0016868 intramolecular transferase activity, phosphotransferases 1.32% (1/76) 5.54 0.021239 0.041758
GO:0046148 pigment biosynthetic process 1.32% (1/76) 5.54 0.021239 0.041758
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors 1.32% (1/76) 5.54 0.021239 0.041758
GO:0002161 aminoacyl-tRNA editing activity 1.32% (1/76) 5.54 0.021239 0.041758
GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors 1.32% (1/76) 5.54 0.021239 0.041758
GO:0030001 metal ion transport 2.63% (2/76) 3.14 0.021677 0.04226
GO:0046854 phosphatidylinositol phosphate biosynthetic process 1.32% (1/76) 5.28 0.025433 0.048764
GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses 1.32% (1/76) 5.28 0.025433 0.048764
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_34 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_98 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_122 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_132 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_183 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_185 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_227 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_239 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_90 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_91 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_121 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_156 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_11 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_22 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_39 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_112 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_128 0.035 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_132 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_163 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_8 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_53 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_120 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_121 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_145 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_177 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_191 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_205 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_243 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_247 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_292 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_302 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_97 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_100 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_118 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_126 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_136 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_180 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (76) (download table)

InterPro Domains

GO Terms

Family Terms